| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is wecB [H]
Identifier: 119775396
GI number: 119775396
Start: 2724529
End: 2725650
Strand: Reverse
Name: wecB [H]
Synonym: Sama_2261
Alternate gene names: 119775396
Gene position: 2725650-2724529 (Counterclockwise)
Preceding gene: 119775397
Following gene: 119775395
Centisome position: 63.3
GC content: 40.91
Gene sequence:
>1122_bases ATGGCAAAAAAGAAAGTGCTTACTGTTTTTGGTACACGTCCTGAAGCAATTAAAATGGCCCCTCTGGTTAATGCTTTAGC ATCCGATGACCGTTTTGAAGCAAAGTGTTGCGTAACAGCTCAACACAGGGAAATGCTCGATCAAGTACTAGAATTATTTG AAATAACACCAGATTATGATCTTGATTTGATGAAAGCAGGGCAGACACTTAATGAAGTCACCGCCGGTATTATTCAAAAA TTAAAACCAGTCCTTCAAGAATTTAAGCCAGATGTCGTGCTTGTGCATGGTGATACAGCAACGACTTTCGCTGCGAGCCT TGCTGCTTACTATGAACAGATTGCAGTAGGACATGTAGAAGCAGGTCTGCGCACTGGCAACATCTACTCGCCTTGGCCAG AAGAAGCAAACCGTCGCTTAACGGGAGTGCTGACTAAATATCATTTTGCGCCAACAGAAACATCGAAGCAGAATCTTCTA AAAGAAAACTTTGAACCAAGCAATATCATTGTCACAGGTAATACTGTTATCGATGCGTTATTGATGGTGAAAGAAAAAAT TGACTCAGACACAGACCTTAACCACACGATAGCTGAACAGTTCCCTTTCATAGATGAAAACAAGAAGCTGATCTTGGTTA CTGGTCATCGTAGGGAAAGTTTTGGTGGTGGATTTGAGCGTATTTGCGAAGCATTGGCAACTGTCGCGAGAATGCATTCT GACGTACAAATCCTATACCCAGTGCATTTGAACCCCAATGTAAGAGAACCAGTAAATCGTATTTTGGGGGATATAGATAA TATTTTTTTGATCGAACCTCAACAATATCTTCCTTTCATTTACCTCATGGACAAGGCGTATATCATTCTTACGGATTCTG GTGGAATACAGGAAGAAGCGCCATCTTTAGGTAAGCCTGTATTAGTTATGAGAGATGCAACTGAGCGTCCTGAAGCCGTA GAGGCTGGTACAGTTAAGTTGGTTGGTACAGATGTCAAACGAATAGTCTCAAGCTTGAATGAATTATTGTGTGATGATTT AGCTTATCAACATATGAGTGTTGCCCATAACCCTTATGGAGATGGGAAAGCGTGTCACAGAATTCTTAAAGCATTAATTT AG
Upstream 100 bases:
>100_bases AATGAACCAAAATAATCTCAGCCGAATTTGAAAGTTTAAAATTTCAAACAGGTAATATAGGTGTTTAATTTTAGGTAAAA CGAAAAAAAGGTCATAAGTA
Downstream 100 bases:
>100_bases TAATAGGTCATTAGATATGATGTCGTTGAAAGAATTAAAAATAGGCGTTATTGGCTTAGGTTACGTTGGTCTCCCTTTGG CCGTTGAGTTTGGCAAAAAA
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MAKKKVLTVFGTRPEAIKMAPLVNALASDDRFEAKCCVTAQHREMLDQVLELFEITPDYDLDLMKAGQTLNEVTAGIIQK LKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVEAGLRTGNIYSPWPEEANRRLTGVLTKYHFAPTETSKQNLL KENFEPSNIIVTGNTVIDALLMVKEKIDSDTDLNHTIAEQFPFIDENKKLILVTGHRRESFGGGFERICEALATVARMHS DVQILYPVHLNPNVREPVNRILGDIDNIFLIEPQQYLPFIYLMDKAYIILTDSGGIQEEAPSLGKPVLVMRDATERPEAV EAGTVKLVGTDVKRIVSSLNELLCDDLAYQHMSVAHNPYGDGKACHRILKALI
Sequences:
>Translated_373_residues MAKKKVLTVFGTRPEAIKMAPLVNALASDDRFEAKCCVTAQHREMLDQVLELFEITPDYDLDLMKAGQTLNEVTAGIIQK LKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVEAGLRTGNIYSPWPEEANRRLTGVLTKYHFAPTETSKQNLL KENFEPSNIIVTGNTVIDALLMVKEKIDSDTDLNHTIAEQFPFIDENKKLILVTGHRRESFGGGFERICEALATVARMHS DVQILYPVHLNPNVREPVNRILGDIDNIFLIEPQQYLPFIYLMDKAYIILTDSGGIQEEAPSLGKPVLVMRDATERPEAV EAGTVKLVGTDVKRIVSSLNELLCDDLAYQHMSVAHNPYGDGKACHRILKALI >Mature_372_residues AKKKVLTVFGTRPEAIKMAPLVNALASDDRFEAKCCVTAQHREMLDQVLELFEITPDYDLDLMKAGQTLNEVTAGIIQKL KPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVEAGLRTGNIYSPWPEEANRRLTGVLTKYHFAPTETSKQNLLK ENFEPSNIIVTGNTVIDALLMVKEKIDSDTDLNHTIAEQFPFIDENKKLILVTGHRRESFGGGFERICEALATVARMHSD VQILYPVHLNPNVREPVNRILGDIDNIFLIEPQQYLPFIYLMDKAYIILTDSGGIQEEAPSLGKPVLVMRDATERPEAVE AGTVKLVGTDVKRIVSSLNELLCDDLAYQHMSVAHNPYGDGKACHRILKALI
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=368, Percent_Identity=71.4673913043478, Blast_Score=539, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 41509; Mature: 41378
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKVLTVFGTRPEAIKMAPLVNALASDDRFEAKCCVTAQHREMLDQVLELFEITPDYD CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCC LDLMKAGQTLNEVTAGIIQKLKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGLRTGNIYSPWPEEANRRLTGVLTKYHFAPTETSKQNLLKENFEPSNIIVTGNTVIDAL HCCEECCCCCCCCHHHCCHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEECHHHHHHH LMVKEKIDSDTDLNHTIAEQFPFIDENKKLILVTGHRRESFGGGFERICEALATVARMHS HHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC DVQILYPVHLNPNVREPVNRILGDIDNIFLIEPQQYLPFIYLMDKAYIILTDSGGIQEEA CCEEEEEEECCCCHHHHHHHHHCCCCCEEEECCHHHCCEEEEECCEEEEEECCCCCCCCC PSLGKPVLVMRDATERPEAVEAGTVKLVGTDVKRIVSSLNELLCDDLAYQHMSVAHNPYG CCCCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DGKACHRILKALI CCHHHHHHHHHHC >Mature Secondary Structure AKKKVLTVFGTRPEAIKMAPLVNALASDDRFEAKCCVTAQHREMLDQVLELFEITPDYD CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCC LDLMKAGQTLNEVTAGIIQKLKPVLQEFKPDVVLVHGDTATTFAASLAAYYEQIAVGHVE HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGLRTGNIYSPWPEEANRRLTGVLTKYHFAPTETSKQNLLKENFEPSNIIVTGNTVIDAL HCCEECCCCCCCCHHHCCHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEECHHHHHHH LMVKEKIDSDTDLNHTIAEQFPFIDENKKLILVTGHRRESFGGGFERICEALATVARMHS HHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC DVQILYPVHLNPNVREPVNRILGDIDNIFLIEPQQYLPFIYLMDKAYIILTDSGGIQEEA CCEEEEEEECCCCHHHHHHHHHCCCCCEEEECCHHHCCEEEEECCEEEEEECCCCCCCCC PSLGKPVLVMRDATERPEAVEAGTVKLVGTDVKRIVSSLNELLCDDLAYQHMSVAHNPYG CCCCCCEEEEECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DGKACHRILKALI CCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]