Click here to switch to the map view.

The map label for this gene is ycjS [C]

Identifier: 119775394

GI number: 119775394

Start: 2722266

End: 2723222

Strand: Reverse

Name: ycjS [C]

Synonym: Sama_2259

Alternate gene names: 119775394

Gene position: 2723222-2722266 (Counterclockwise)

Preceding gene: 119775395

Following gene: 119775393

Centisome position: 63.24

GC content: 41.27

Gene sequence:

>957_bases
ATGAAAAACTTTGCATTAATCGGTGCTGCAGGATACATCGCACCTCGTCACTTACGAGCAATTAAAGATACGGGTAATAA
TTTGGTTGCTGCTATGGACATCAATGATTCAGTCGGCATTATGGATAGTCATTTCCCAGAAGCAGAGTTTTTTACTGAAT
TTGAAGACTTTACCGCATTTGTTGAAGATCAAGCGCTTAAAGGAAAGAAGTTAGATTATATCTCAATTTGTAGCCCTAAT
TATCTGCATGCGCCTCATATGAAGTATGCGCTAAAAAACGGGATAGATGTAATCTGTGAAAAGCCATTAGTACTTCATTC
CGAAGATATGGATGTACTCAAAGAGTATGAGCAAAAGTATGGTGCAAAGGTAAACTCAATTCTGCAATTGCGCCTACATC
CGTCAATCATTGCGCTGCGAGAAAAAGTAGCTGCCGCGCCAGCGGACAAAGTTTTTGATGTTGACCTAACGTACATGACA
TCTCGTGGCAAATGGTACATGAAGTCATGGAAAGGGTTTGACCACAAATCTGGGGGGGTTGCGACAAATATTGGTGTGCA
TTTCTATGATATGTTGCATTTCATCTTCGGGGATTTGAAATGTAATGAAGTTCATTACAGAGACGAAAAAACGGCTAGCG
GTTACTTAGAGTATGAGCGTGCACGAGTAAAATGGTTCCTCTCTATTGACGCAAATAACCTGCCTGATAACGCGGTTCAG
GGCGAAAAATTAACCTACCGTAGTATCACAATTAGTGACGGTGAAAATACAGTAGAGCTTGAGTTTTCGGGCGGTTTCAC
CGATTTACATACGGTCAGCTATCAAAACGTACTTGCGGGTAATGGTTTTGGTATCGATGAAAACCGTATCGCGATTGAGA
CGGTAGAAAATATCAGAACTCAGACTGTTATAGCGGCCGGTGATAAAGCTCACCCATTGCTAACAAAGGTTTTGTAA

Upstream 100 bases:

>100_bases
AAAAGTACGACTTTTAGGTAGGCCTAATCATGTGGTGTACGATGTAAAATACGTATTTGGTTTGAATGATTCAGATATCC
GTTTGTAAAAGGAAATGACA

Downstream 100 bases:

>100_bases
TACATGGATTATCAAGTACATCCAAGCGCTATCGTTGATGATGGCGCACAAATTGGTGCAAATACACGGGTTTGGCATTT
TGTGCATGTATGCGGTGGTG

Product: MviM protein

Products: NA

Alternate protein names: Oxidoreductase; Oxidoreductase Domain Protein; MviM Protein; Lipopolysaccharide Biosynthesis Protein WbpB; Gfo/Idh/MocA Family Oxidoreductase; Oxidoreductase-Like; Lipopolysaccharide Biosynthesis Protein; Oxidoreductase Gfo/Idh/MocA Family; NADH-Dependent Dyhydrogenase; Oxidoreductase Family Protein; Uracil-DNA Glycosylase Superfamily Protein; Lipopolysaccaride Biosynthesis Protein WbpB; Regulatory Protein LacI; Oxidoreductase-Like Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKNFALIGAAGYIAPRHLRAIKDTGNNLVAAMDINDSVGIMDSHFPEAEFFTEFEDFTAFVEDQALKGKKLDYISICSPN
YLHAPHMKYALKNGIDVICEKPLVLHSEDMDVLKEYEQKYGAKVNSILQLRLHPSIIALREKVAAAPADKVFDVDLTYMT
SRGKWYMKSWKGFDHKSGGVATNIGVHFYDMLHFIFGDLKCNEVHYRDEKTASGYLEYERARVKWFLSIDANNLPDNAVQ
GEKLTYRSITISDGENTVELEFSGGFTDLHTVSYQNVLAGNGFGIDENRIAIETVENIRTQTVIAAGDKAHPLLTKVL

Sequences:

>Translated_318_residues
MKNFALIGAAGYIAPRHLRAIKDTGNNLVAAMDINDSVGIMDSHFPEAEFFTEFEDFTAFVEDQALKGKKLDYISICSPN
YLHAPHMKYALKNGIDVICEKPLVLHSEDMDVLKEYEQKYGAKVNSILQLRLHPSIIALREKVAAAPADKVFDVDLTYMT
SRGKWYMKSWKGFDHKSGGVATNIGVHFYDMLHFIFGDLKCNEVHYRDEKTASGYLEYERARVKWFLSIDANNLPDNAVQ
GEKLTYRSITISDGENTVELEFSGGFTDLHTVSYQNVLAGNGFGIDENRIAIETVENIRTQTVIAAGDKAHPLLTKVL
>Mature_318_residues
MKNFALIGAAGYIAPRHLRAIKDTGNNLVAAMDINDSVGIMDSHFPEAEFFTEFEDFTAFVEDQALKGKKLDYISICSPN
YLHAPHMKYALKNGIDVICEKPLVLHSEDMDVLKEYEQKYGAKVNSILQLRLHPSIIALREKVAAAPADKVFDVDLTYMT
SRGKWYMKSWKGFDHKSGGVATNIGVHFYDMLHFIFGDLKCNEVHYRDEKTASGYLEYERARVKWFLSIDANNLPDNAVQ
GEKLTYRSITISDGENTVELEFSGGFTDLHTVSYQNVLAGNGFGIDENRIAIETVENIRTQTVIAAGDKAHPLLTKVL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35711; Mature: 35711

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFALIGAAGYIAPRHLRAIKDTGNNLVAAMDINDSVGIMDSHFPEAEFFTEFEDFTAF
CCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
VEDQALKGKKLDYISICSPNYLHAPHMKYALKNGIDVICEKPLVLHSEDMDVLKEYEQKY
HHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHH
GAKVNSILQLRLHPSIIALREKVAAAPADKVFDVDLTYMTSRGKWYMKSWKGFDHKSGGV
CCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCE
ATNIGVHFYDMLHFIFGDLKCNEVHYRDEKTASGYLEYERARVKWFLSIDANNLPDNAVQ
EEECCHHHHHHHHHHHCCCEECEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCC
GEKLTYRSITISDGENTVELEFSGGFTDLHTVSYQNVLAGNGFGIDENRIAIETVENIRT
CCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEHHHEEECCCCCCCCCCEEEEEHHCCCE
QTVIAAGDKAHPLLTKVL
EEEEEECCCCCCHHHHCC
>Mature Secondary Structure
MKNFALIGAAGYIAPRHLRAIKDTGNNLVAAMDINDSVGIMDSHFPEAEFFTEFEDFTAF
CCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
VEDQALKGKKLDYISICSPNYLHAPHMKYALKNGIDVICEKPLVLHSEDMDVLKEYEQKY
HHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHCCCEEEECCCEEEECCCHHHHHHHHHHH
GAKVNSILQLRLHPSIIALREKVAAAPADKVFDVDLTYMTSRGKWYMKSWKGFDHKSGGV
CCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCE
ATNIGVHFYDMLHFIFGDLKCNEVHYRDEKTASGYLEYERARVKWFLSIDANNLPDNAVQ
EEECCHHHHHHHHHHHCCCEECEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCC
GEKLTYRSITISDGENTVELEFSGGFTDLHTVSYQNVLAGNGFGIDENRIAIETVENIRT
CCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEHHHEEECCCCCCCCCCEEEEEHHCCCE
QTVIAAGDKAHPLLTKVL
EEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA