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The map label for this gene is yaiS [C]

Identifier: 119775383

GI number: 119775383

Start: 2712197

End: 2712874

Strand: Reverse

Name: yaiS [C]

Synonym: Sama_2248

Alternate gene names: 119775383

Gene position: 2712874-2712197 (Counterclockwise)

Preceding gene: 119775384

Following gene: 119775382

Centisome position: 63.0

GC content: 42.48

Gene sequence:

>678_bases
ATGTTAAATATTGTTGTAGTTGCTCACCCGGATGACGAAATTTTGGGATTTGGTGCCACAGGTGCAAAGTTGGCTGCCAA
AGGTGAAGTTGTCCAGCCTATTATTTTATGCGGCAGCGTCGATGCACGCACTTTGCGACCGACCGACGAAGAGCTTCATT
CTGATATGCTAAAGGCTAATTCTTTGGTTGGTTTTTCTAAACCTGTTTTAGGCGATTTCCCGAATATTAGCATGAACACT
GTGCCTCATGTTGAACTTGTGCAGTTTATTGAAGAGCAGATAAAGAAATTTCGGCCAAACAGAATTTTTACTCATCATCC
AAATGATTTAAATAACGACCATACACAGGTGTCTAATGCATGTTTGGCCGCGTCTAGGTTGTTTCAACGTAGAAACGACT
TACCAGCTCTTGAGGCCTTGTATTTTATGGAGATTTTGTCATCAACTGATTGGGCTTTTCCCGCCGTTGGTGATGGATTT
AAACCTACAACTTTCGTTGAGATTACTTGTGAGCTTGAGAAGAAGCTAGCAGCCTTGCATCACTATAGAAATGTAATGCG
TCCGTTTCCACACCCACGTAGTGATGAAGTAGTAACAGGCTTGGCTGCTTATCGAGGAGGACAGGCTGGTCTTAAATATG
CTGAGGCATTTCAGCTTGTATTTAAACAAGGAGTGTGA

Upstream 100 bases:

>100_bases
GTATGGTTCTCTTGAGATAAATAATACTAAAGCAACTAAAGTGATATCTTGGAAGCCGCTCGAAAAGCCAGAAAAGAATG
ATTTTGTTTAAGGTCTTGCT

Downstream 100 bases:

>100_bases
TTTTAAATGTACTCAAAGATAATTAAGCGTATTTTCGATTTATTTATTGTTTTGTTTGCAACAGTTTTTTTGTTTCCTTT
ACTGATTGCTGTTTGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: LmbE-Like Protein; GlcNAc-PI De-N-Acetylase Family Protein; Lmbe Family Protein; GlcNAc-PI De-N-Acetylase Family

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLNIVVVAHPDDEILGFGATGAKLAAKGEVVQPIILCGSVDARTLRPTDEELHSDMLKANSLVGFSKPVLGDFPNISMNT
VPHVELVQFIEEQIKKFRPNRIFTHHPNDLNNDHTQVSNACLAASRLFQRRNDLPALEALYFMEILSSTDWAFPAVGDGF
KPTTFVEITCELEKKLAALHHYRNVMRPFPHPRSDEVVTGLAAYRGGQAGLKYAEAFQLVFKQGV

Sequences:

>Translated_225_residues
MLNIVVVAHPDDEILGFGATGAKLAAKGEVVQPIILCGSVDARTLRPTDEELHSDMLKANSLVGFSKPVLGDFPNISMNT
VPHVELVQFIEEQIKKFRPNRIFTHHPNDLNNDHTQVSNACLAASRLFQRRNDLPALEALYFMEILSSTDWAFPAVGDGF
KPTTFVEITCELEKKLAALHHYRNVMRPFPHPRSDEVVTGLAAYRGGQAGLKYAEAFQLVFKQGV
>Mature_225_residues
MLNIVVVAHPDDEILGFGATGAKLAAKGEVVQPIILCGSVDARTLRPTDEELHSDMLKANSLVGFSKPVLGDFPNISMNT
VPHVELVQFIEEQIKKFRPNRIFTHHPNDLNNDHTQVSNACLAASRLFQRRNDLPALEALYFMEILSSTDWAFPAVGDGF
KPTTFVEITCELEKKLAALHHYRNVMRPFPHPRSDEVVTGLAAYRGGQAGLKYAEAFQLVFKQGV

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24966; Mature: 24966

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIVVVAHPDDEILGFGATGAKLAAKGEVVQPIILCGSVDARTLRPTDEELHSDMLKAN
CEEEEEEECCCCCEEECCCCCCCCCCCCCHHCCEEEECCCCCCCCCCCHHHHHHHHHHHH
SLVGFSKPVLGDFPNISMNTVPHVELVQFIEEQIKKFRPNRIFTHHPNDLNNDHTQVSNA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH
CLAASRLFQRRNDLPALEALYFMEILSSTDWAFPAVGDGFKPTTFVEITCELEKKLAALH
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHH
HYRNVMRPFPHPRSDEVVTGLAAYRGGQAGLKYAEAFQLVFKQGV
HHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNIVVVAHPDDEILGFGATGAKLAAKGEVVQPIILCGSVDARTLRPTDEELHSDMLKAN
CEEEEEEECCCCCEEECCCCCCCCCCCCCHHCCEEEECCCCCCCCCCCHHHHHHHHHHHH
SLVGFSKPVLGDFPNISMNTVPHVELVQFIEEQIKKFRPNRIFTHHPNDLNNDHTQVSNA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH
CLAASRLFQRRNDLPALEALYFMEILSSTDWAFPAVGDGFKPTTFVEITCELEKKLAALH
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHH
HYRNVMRPFPHPRSDEVVTGLAAYRGGQAGLKYAEAFQLVFKQGV
HHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA