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The map label for this gene is wcaJ [C]

Identifier: 119775382

GI number: 119775382

Start: 2711624

End: 2712190

Strand: Reverse

Name: wcaJ [C]

Synonym: Sama_2247

Alternate gene names: 119775382

Gene position: 2712190-2711624 (Counterclockwise)

Preceding gene: 119775383

Following gene: 119775381

Centisome position: 62.98

GC content: 37.57

Gene sequence:

>567_bases
ATGTACTCAAAGATAATTAAGCGTATTTTCGATTTATTTATTGTTTTGTTTGCAACAGTTTTTTTGTTTCCTTTACTGAT
TGCTGTTTGCTTTTTAATTAAGGTCTTTGATCCCGGTCCAATTATTTTCAAGCAAAAACGCATTGGTCGGAATGCGAAAG
AATTCGATTTTTATAAATTTAGAAGCATGCCGGTTAACACAGGGGACATTCCGTCCGATAAATTGGGCTCAATAGACATT
ACTTGGGTTGGTAGGCTTATTAGAAGGACTAATCTTGATGAATTACCACAGTTATTTAATGTCTTGAAAGGTGATATGAG
TATTGTTGGTCCACGTCCACCAATTGTATCTCAGCGGCAATTGGTAGAGCTTAGAAAGCAGAATGGCGCAATAGCGTGTA
GACCAGGTTTGACTGGATTAGCTCAAGTTAGCGCGTTTGACGGGATGACAGTTGAGCAGAAAGCTGCTTTTGATGCTGAA
TATGCTAGAAAGGTCTCGTTTTTAACTGATGTTAAAATAATCCTTCGTACATTCACTTATTTGCTTAAGCCGCCACCTGT
TTATTAA

Upstream 100 bases:

>100_bases
TGAAGTAGTAACAGGCTTGGCTGCTTATCGAGGAGGACAGGCTGGTCTTAAATATGCTGAGGCATTTCAGCTTGTATTTA
AACAAGGAGTGTGATTTTAA

Downstream 100 bases:

>100_bases
CTAAGGTTTATTTATGATTAAAGTTGGTTTTGTAACTTGTGTACAACTCGGCTACTCCTGTATGGAGGCTATATATGAGG
TTGGTGGTAAATTGGATTTG

Product: capsular polysaccharide synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MYSKIIKRIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKFRSMPVNTGDIPSDKLGSIDI
TWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQLVELRKQNGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAE
YARKVSFLTDVKIILRTFTYLLKPPPVY

Sequences:

>Translated_188_residues
MYSKIIKRIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKFRSMPVNTGDIPSDKLGSIDI
TWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQLVELRKQNGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAE
YARKVSFLTDVKIILRTFTYLLKPPPVY
>Mature_188_residues
MYSKIIKRIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKFRSMPVNTGDIPSDKLGSIDI
TWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQLVELRKQNGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAE
YARKVSFLTDVKIILRTFTYLLKPPPVY

Specific function: May function as a sugar transferase [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=189, Percent_Identity=38.6243386243386, Blast_Score=126, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 21376; Mature: 21376

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKIIKRIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCHHHHHHHH
RSMPVNTGDIPSDKLGSIDITWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQ
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCHHH
LVELRKQNGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAEYARKVSFLTDVKIILRTFTY
HHHHHHCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKPPPVY
HHCCCCCC
>Mature Secondary Structure
MYSKIIKRIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCHHHHHHHH
RSMPVNTGDIPSDKLGSIDITWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQ
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCHHH
LVELRKQNGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAEYARKVSFLTDVKIILRTFTY
HHHHHHCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKPPPVY
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]