| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is glmM2
Identifier: 119775378
GI number: 119775378
Start: 2706734
End: 2708092
Strand: Reverse
Name: glmM2
Synonym: Sama_2243
Alternate gene names: 119775378
Gene position: 2708092-2706734 (Counterclockwise)
Preceding gene: 119775379
Following gene: 119775377
Centisome position: 62.89
GC content: 50.99
Gene sequence:
>1359_bases ATGTCACGGAAGTACTTTGGCACCGATGGTGTACGTGGAAAGGTGGGAGAGTTTCCGATAACTCCTGATTTTGCGATGAA ACTGGGCTGGGCTGCGGGTACTGTGATGGCAGCATCAGGTACCAAAGAAGTGATTATCGGCAAGGATACCCGCCTCAGTG GTTATATGCTCGAATCTGCCATGGAAGCTGGCTTTTGTGCGGCCGGTGTCAATGTGGCCTTAACCGGCCCACTGCCAACC CCTGCGATTGCCTATCTTACCTCTACCTTCAGGGCCGATGCCGGTGTGGTTATCAGTGCTTCACATAACCCTTATTACGA TAATGGTATTAAGTTTTTTTCTAATACAGGTACCAAGCTTACCGATGAGCAAGAACTCGAAATCGAGCGACTGCTGGTTT CAGCTATCGAAGGTGGTGCCATGACGTGTGTTGCTTCCGACAAGCTGGGTAAGGTTCGACGCATTAACGATGCCGCAGGG CGTTATATTGAATTTTGTAAAGGCACTTTCCCAAACAGCCTTTCTTTAACTGGCCTTAAAATTGTGGTCGACAGTGCCCA TGGCGCGGCCTATCACATTGCCAAGAATGTGTATCGTGAGTTGGGGGCTGAAGTCATCAGCATCAACGATAAGCCCGATG GGATTAACATTAACGAGCATTGTGGTGCTACCCACATGGATAGCCTGCAAACAGCCGTAATGATCCACGAAGCGGATTTG GGTATTGCGCTGGATGGCGATGCCGACCGGTTAATGATGGTCGACAGTAAAGGTCAGGTCATTGACGGCGATGCGTTATT GTATTTGCTGGCTAAATCCGCCCAGCAGCGAGGTGAGCAGGTTTCCGGGGTTATTGGCACCCTGATGTCAAACCTTGGGT TTGAACAGGCTCTTGCCAATCTTGGTATCCCTTTCAAGCGTGCCAAAGTGGGTGATAGATACGTTGTTGAGCTGCTTAAA GAAACGGGATGGCGCCTCGGCGGTGAGAACTCCGGCCATCTGCTGATGCTTGATTTCACCACAACTGGGGATGCTATAGT CGCTTCGCTGCAGGTGCTGAGGGCGTTGCTGGAATCTGGTGCAGGCCTTGCTGATGCCATTACTGAGCTAAATATGTTTC CTCAGGTGCTGATTAATGTGCGTCTCAATGGCAATGCAGCCGTTGGCTTGTCGCATCCGTCGGTATCCGATGCGGTTGCA ACGGCCGAATCGGCTCTTGGCAACGATGGGCGCGTATTGCTGCGTAAATCAGGTACTGAGCCCCTCATCCGTGTAATGGT TGAAGCCAAAGACGCCGTAAAGGCCAATCAATATGCTGAGCTGATTGCGGATGCAGTAAGGGCCGTATTTCCAGCATAA
Upstream 100 bases:
>100_bases GGCATCAATAAATTGTTCATTGAATGCGCTTGTATTTAACATTGTGTAGTTGTTCAAGGCCAGGGTTATGCCTGGCCTTC TGTTTTTGGAGATGTGTTGT
Downstream 100 bases:
>100_bases GCCCTGGACCTATTTGCCACACTTAAAGCCAGCAGGGTAAACTTGCTGGCTTTTTTGTATTTTGGCTGGGCAAAGTTATT AGCTGGGCTTAAGGGCGCAG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSRKYFGTDGVRGKVGEFPITPDFAMKLGWAAGTVMAASGTKEVIIGKDTRLSGYMLESAMEAGFCAAGVNVALTGPLPT PAIAYLTSTFRADAGVVISASHNPYYDNGIKFFSNTGTKLTDEQELEIERLLVSAIEGGAMTCVASDKLGKVRRINDAAG RYIEFCKGTFPNSLSLTGLKIVVDSAHGAAYHIAKNVYRELGAEVISINDKPDGININEHCGATHMDSLQTAVMIHEADL GIALDGDADRLMMVDSKGQVIDGDALLYLLAKSAQQRGEQVSGVIGTLMSNLGFEQALANLGIPFKRAKVGDRYVVELLK ETGWRLGGENSGHLLMLDFTTTGDAIVASLQVLRALLESGAGLADAITELNMFPQVLINVRLNGNAAVGLSHPSVSDAVA TAESALGNDGRVLLRKSGTEPLIRVMVEAKDAVKANQYAELIADAVRAVFPA
Sequences:
>Translated_452_residues MSRKYFGTDGVRGKVGEFPITPDFAMKLGWAAGTVMAASGTKEVIIGKDTRLSGYMLESAMEAGFCAAGVNVALTGPLPT PAIAYLTSTFRADAGVVISASHNPYYDNGIKFFSNTGTKLTDEQELEIERLLVSAIEGGAMTCVASDKLGKVRRINDAAG RYIEFCKGTFPNSLSLTGLKIVVDSAHGAAYHIAKNVYRELGAEVISINDKPDGININEHCGATHMDSLQTAVMIHEADL GIALDGDADRLMMVDSKGQVIDGDALLYLLAKSAQQRGEQVSGVIGTLMSNLGFEQALANLGIPFKRAKVGDRYVVELLK ETGWRLGGENSGHLLMLDFTTTGDAIVASLQVLRALLESGAGLADAITELNMFPQVLINVRLNGNAAVGLSHPSVSDAVA TAESALGNDGRVLLRKSGTEPLIRVMVEAKDAVKANQYAELIADAVRAVFPA >Mature_451_residues SRKYFGTDGVRGKVGEFPITPDFAMKLGWAAGTVMAASGTKEVIIGKDTRLSGYMLESAMEAGFCAAGVNVALTGPLPTP AIAYLTSTFRADAGVVISASHNPYYDNGIKFFSNTGTKLTDEQELEIERLLVSAIEGGAMTCVASDKLGKVRRINDAAGR YIEFCKGTFPNSLSLTGLKIVVDSAHGAAYHIAKNVYRELGAEVISINDKPDGININEHCGATHMDSLQTAVMIHEADLG IALDGDADRLMMVDSKGQVIDGDALLYLLAKSAQQRGEQVSGVIGTLMSNLGFEQALANLGIPFKRAKVGDRYVVELLKE TGWRLGGENSGHLLMLDFTTTGDAIVASLQVLRALLESGAGLADAITELNMFPQVLINVRLNGNAAVGLSHPSVSDAVAT AESALGNDGRVLLRKSGTEPLIRVMVEAKDAVKANQYAELIADAVRAVFPA
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=448, Percent_Identity=60.7142857142857, Blast_Score=541, Evalue=1e-155, Organism=Escherichia coli, GI1788361, Length=448, Percent_Identity=28.7946428571429, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM2_SHEAM (A1S7U2)
Other databases:
- EMBL: CP000507 - RefSeq: YP_928118.1 - ProteinModelPortal: A1S7U2 - SMR: A1S7U2 - STRING: A1S7U2 - GeneID: 4604493 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2243 - NMPDR: fig|326297.7.peg.2105 - eggNOG: COG1109 - HOGENOM: HBG644964 - PhylomeDB: A1S7U2 - ProtClustDB: CLSK2516801 - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47825; Mature: 47694
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 101-101
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKYFGTDGVRGKVGEFPITPDFAMKLGWAAGTVMAASGTKEVIIGKDTRLSGYMLESA CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHH MEAGFCAAGVNVALTGPLPTPAIAYLTSTFRADAGVVISASHNPYYDNGIKFFSNTGTKL HHCCCEECCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCC TDEQELEIERLLVSAIEGGAMTCVASDKLGKVRRINDAAGRYIEFCKGTFPNSLSLTGLK CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCEECEEE IVVDSAHGAAYHIAKNVYRELGAEVISINDKPDGININEHCGATHMDSLQTAVMIHEADL EEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCCCHHHHHEEEEEEECCC GIALDGDADRLMMVDSKGQVIDGDALLYLLAKSAQQRGEQVSGVIGTLMSNLGFEQALAN CEEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LGIPFKRAKVGDRYVVELLKETGWRLGGENSGHLLMLDFTTTGDAIVASLQVLRALLESG CCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC AGLADAITELNMFPQVLINVRLNGNAAVGLSHPSVSDAVATAESALGNDGRVLLRKSGTE CCHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCC PLIRVMVEAKDAVKANQYAELIADAVRAVFPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRKYFGTDGVRGKVGEFPITPDFAMKLGWAAGTVMAASGTKEVIIGKDTRLSGYMLESA CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHH MEAGFCAAGVNVALTGPLPTPAIAYLTSTFRADAGVVISASHNPYYDNGIKFFSNTGTKL HHCCCEECCCCEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCC TDEQELEIERLLVSAIEGGAMTCVASDKLGKVRRINDAAGRYIEFCKGTFPNSLSLTGLK CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCEECEEE IVVDSAHGAAYHIAKNVYRELGAEVISINDKPDGININEHCGATHMDSLQTAVMIHEADL EEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCCCHHHHHEEEEEEECCC GIALDGDADRLMMVDSKGQVIDGDALLYLLAKSAQQRGEQVSGVIGTLMSNLGFEQALAN CEEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LGIPFKRAKVGDRYVVELLKETGWRLGGENSGHLLMLDFTTTGDAIVASLQVLRALLESG CCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC AGLADAITELNMFPQVLINVRLNGNAAVGLSHPSVSDAVATAESALGNDGRVLLRKSGTE CCHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCC PLIRVMVEAKDAVKANQYAELIADAVRAVFPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA