Click here to switch to the map view.

The map label for this gene is 119775324

Identifier: 119775324

GI number: 119775324

Start: 2647632

End: 2647949

Strand: Reverse

Name: 119775324

Synonym: Sama_2189

Alternate gene names: NA

Gene position: 2647949-2647632 (Counterclockwise)

Preceding gene: 119775325

Following gene: 119775323

Centisome position: 61.49

GC content: 54.72

Gene sequence:

>318_bases
ATGGAACAACGTAAATGTTTATTGGCCGGTGGCAATTTGCTGCAGGCCCACACCTGGAAAGGGCTGTTACAGGTTGCCGG
TATACAGGTGGAACTCAGAGGCGAGGCGCTGCTCGGTGGTGTAGGTGAACTGCCGGTGGATCTGCAAAACGTGGAGTTGT
GGGTCAATGAATCTGAGCTCGCCAAGGCCCAAAGCCAACTCGACAGTCTGGGCGGCGACCGTCCCCAATGGCAATGTTTG
AACTGCCATGAGATGAATGAGGCCAGCTTTGAGCTGTGTTGGCACTGCAGTTCTGAGCGTAGCGAAGCCCATAACTGA

Upstream 100 bases:

>100_bases
CTTTTCAGTGCTCGATTTTACAGCGATTTGTCGCTAGCATGGGCTGGCCCGGGAGTGGGGCATATATCAAAAGAGACAGC
AGTAGTTGTAGGAAAGTCCG

Downstream 100 bases:

>100_bases
ACTTGTGCATGCATCACTTGTGAAGCCCTGACCATAGCACTACACTGGTCGCAAAAGGGCATCATAAGGAATTCAAAATG
CAGCATAATCCCGGATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MEQRKCLLAGGNLLQAHTWKGLLQVAGIQVELRGEALLGGVGELPVDLQNVELWVNESELAKAQSQLDSLGGDRPQWQCL
NCHEMNEASFELCWHCSSERSEAHN

Sequences:

>Translated_105_residues
MEQRKCLLAGGNLLQAHTWKGLLQVAGIQVELRGEALLGGVGELPVDLQNVELWVNESELAKAQSQLDSLGGDRPQWQCL
NCHEMNEASFELCWHCSSERSEAHN
>Mature_105_residues
MEQRKCLLAGGNLLQAHTWKGLLQVAGIQVELRGEALLGGVGELPVDLQNVELWVNESELAKAQSQLDSLGGDRPQWQCL
NCHEMNEASFELCWHCSSERSEAHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11654; Mature: 11654

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01358 ZF_RANBP2_1 ; PS50199 ZF_RANBP2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRKCLLAGGNLLQAHTWKGLLQVAGIQVELRGEALLGGVGELPVDLQNVELWVNESEL
CCCCEEEEECCCEEEHHHHHHHHHHCCEEEEEECCEEECCCCCCCCCEEEEEEEECHHHH
AKAQSQLDSLGGDRPQWQCLNCHEMNEASFELCWHCSSERSEAHN
HHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MEQRKCLLAGGNLLQAHTWKGLLQVAGIQVELRGEALLGGVGELPVDLQNVELWVNESEL
CCCCEEEEECCCEEEHHHHHHHHHHCCEEEEEECCEEECCCCCCCCCEEEEEEEECHHHH
AKAQSQLDSLGGDRPQWQCLNCHEMNEASFELCWHCSSERSEAHN
HHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA