Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775311

Identifier: 119775311

GI number: 119775311

Start: 2632258

End: 2632962

Strand: Direct

Name: 119775311

Synonym: Sama_2176

Alternate gene names: NA

Gene position: 2632258-2632962 (Clockwise)

Preceding gene: 119775310

Following gene: 119775312

Centisome position: 61.13

GC content: 53.62

Gene sequence:

>705_bases
ATGGATGAACTTGAGTTTCGCCGCCGAGCCTATGGCGAACCGCAAAGCCAGGATCCTGAGTTTTTACAGGCTCAAAAGGA
GGCCAGTGGCCGCGATGCATTTGTTAACGATCTTAAGGCGCTGGACAGAAAAATCGCCAAAGCACTCAAGGTGGATGTCC
CTGAAGATTTGGCCGACAAGCTACTGCTGCGCCAACAGTTGACCGTTCATCACAAACAGCGGCGCCGTACCACTTTTTTA
GTGGCCATGGCGGCTTCCGTGGCTTTTGTTTTTGGTTTGAGCTTCAGTCTGCTTCGACTGGGGCCTGTGGACTTGGGTGA
ACATGCCCTCAGCCACGTGTATCACGAATACAAAGCCTTGCAGAGTGAAAGGGATATAGACCTTGCCGATATTAACGCCA
GTCTGGTGAGTGTGCCCGGCCTGGAGTCTGCCCATTTCAGCAGCGCGCCCGGCCGGGTGGTGTTCAAGGCCTACTGTGAT
TTTCAGGGAGTGCGCAGTTTGCATCTGGTGCTGGAAGGCGACGCCGGTAAGGTCACCCTCTTTATCGTGCCGGTGGAAGA
GCGGATGCAACTGCCCACCCAATTTGCCGACAACCGCTATCAGGGTATTGGCGTCAAAACTGAGGATGCCTATCTGCTGC
TGGTTGGCGAAGAAAAATCCGCGCTCGAACACCTCGAACAAAACCTGCTGCAAAGCTTTATTTAA

Upstream 100 bases:

>100_bases
CTGCTTGAGCTTAACCGCAACACCGTCATGACCCGGCTCTTTCGGGCCCGTAACCAGCTAAAAGACGCACTTGAACAACC
AGAAAGCCGAGGTCAATCCA

Downstream 100 bases:

>100_bases
GTGACCAACACAGACGGCCAATCGGCCGTCTGCTTATTTTTATGCGACACAACTTCGCGCCACGCTGGCCTGTCATTTAC
CAATTCGACTCTCTTCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDELEFRRRAYGEPQSQDPEFLQAQKEASGRDAFVNDLKALDRKIAKALKVDVPEDLADKLLLRQQLTVHHKQRRRTTFL
VAMAASVAFVFGLSFSLLRLGPVDLGEHALSHVYHEYKALQSERDIDLADINASLVSVPGLESAHFSSAPGRVVFKAYCD
FQGVRSLHLVLEGDAGKVTLFIVPVEERMQLPTQFADNRYQGIGVKTEDAYLLLVGEEKSALEHLEQNLLQSFI

Sequences:

>Translated_234_residues
MDELEFRRRAYGEPQSQDPEFLQAQKEASGRDAFVNDLKALDRKIAKALKVDVPEDLADKLLLRQQLTVHHKQRRRTTFL
VAMAASVAFVFGLSFSLLRLGPVDLGEHALSHVYHEYKALQSERDIDLADINASLVSVPGLESAHFSSAPGRVVFKAYCD
FQGVRSLHLVLEGDAGKVTLFIVPVEERMQLPTQFADNRYQGIGVKTEDAYLLLVGEEKSALEHLEQNLLQSFI
>Mature_234_residues
MDELEFRRRAYGEPQSQDPEFLQAQKEASGRDAFVNDLKALDRKIAKALKVDVPEDLADKLLLRQQLTVHHKQRRRTTFL
VAMAASVAFVFGLSFSLLRLGPVDLGEHALSHVYHEYKALQSERDIDLADINASLVSVPGLESAHFSSAPGRVVFKAYCD
FQGVRSLHLVLEGDAGKVTLFIVPVEERMQLPTQFADNRYQGIGVKTEDAYLLLVGEEKSALEHLEQNLLQSFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26263; Mature: 26263

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELEFRRRAYGEPQSQDPEFLQAQKEASGRDAFVNDLKALDRKIAKALKVDVPEDLADK
CCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLLRQQLTVHHKQRRRTTFLVAMAASVAFVFGLSFSLLRLGPVDLGEHALSHVYHEYKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QSERDIDLADINASLVSVPGLESAHFSSAPGRVVFKAYCDFQGVRSLHLVLEGDAGKVTL
HCCCCCCCEECCHHEEECCCCCCCCCCCCCCCEEEEEHHCHHCCCEEEEEEECCCCEEEE
FIVPVEERMQLPTQFADNRYQGIGVKTEDAYLLLVGEEKSALEHLEQNLLQSFI
EEEEHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDELEFRRRAYGEPQSQDPEFLQAQKEASGRDAFVNDLKALDRKIAKALKVDVPEDLADK
CCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLLRQQLTVHHKQRRRTTFLVAMAASVAFVFGLSFSLLRLGPVDLGEHALSHVYHEYKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QSERDIDLADINASLVSVPGLESAHFSSAPGRVVFKAYCDFQGVRSLHLVLEGDAGKVTL
HCCCCCCCEECCHHEEECCCCCCCCCCCCCCCEEEEEHHCHHCCCEEEEEEECCCCEEEE
FIVPVEERMQLPTQFADNRYQGIGVKTEDAYLLLVGEEKSALEHLEQNLLQSFI
EEEEHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA