The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775271

Identifier: 119775271

GI number: 119775271

Start: 2581701

End: 2583008

Strand: Reverse

Name: 119775271

Synonym: Sama_2136

Alternate gene names: NA

Gene position: 2583008-2581701 (Counterclockwise)

Preceding gene: 119775275

Following gene: 119775263

Centisome position: 59.98

GC content: 55.66

Gene sequence:

>1308_bases
ATGTGTGTTTTGCGTAAGTGGTTGAAAGGCATCGCGGCCGTAAAATTTGCCCTGATTGTGCTGCTTGGGCTGTCCATTTG
GTCCACTCGTATCCCTGATATTGCCTATCATCCTGTTTTGCCTGAACAGGCTCTCGCCAATTTCCACGTCATCGAATTCA
ATGATGACGGGCAAATGCATCTGCCCGCGCAGTTTGATGCCCTGAAGGCGCGCCTGAGGACGACTCCGGGTTCAAATCTG
CTGATTTTTATCCATGGCTGGCATCACAATGCAGCGCCAACGGATGATAATTTTGTTGCCTTTCAGCGTTTTTACCGGCA
AATGTCGGCGACTAACCCATCGCTGTTGGGCCTCTATATCGGTTGGCGTGGCGATCAGTACGATCCTTTTTGGCTCGATG
GCTCTGACGACCCTGACAGTGTGGTTGAGCCACTGGACTTTCCCACCATATTCACCAGCAAGCGAGTGGCAAAACAGGTT
GGTGAGCGGGGTGTAAAGCCCTTACTGGCTGAGCTCGATACCCTCGCGGATGAAGGCATCCTGGGTCGTTATACCCTCAT
AGGTCACAGCCTCGGTGGCGTGGTGGCGCTCCATGCCCGTAAACAAAGCCTGCTGGAGAATCTGGCAAAGGGCCAGGGCG
AGCGGCATCTTACCGTGCTGCTTAACCCCGCAGCCTCAGCCAGGGAATACCAACCGCTGGATAAATGGTGCAGCCCAGAC
AATACCGGGCCAGCCATGCTGGTGTTGCAGTCCAAAACGGATTATGCCGTGCTTGAGGCCTTCAATTGGCTCAAAGAAGG
AGAGCGTGCTGTGGGCAACTCCTGGGCGATTACCCACGATATTGACCCCTGTCCGGGGAGGGATTGCAGCCGCACGCTTA
TGCTCCCCAAGGCGCTGCAGGACCATGATGCCAAACCCGGCTGTATGCAGGTGCTGGATGGCCCGGGCTGGAAGATCCGT
GCTCGTCTGCACGCCCGCAAAACCGTACAAAGCTGCGAGGATGCCAACCGTCAGGCAGTATGGGTGCTGGCGGTTGCCGA
TGGGGTGATTGCCGGTCACAACGGTATCCTGACCGAAGTGCAGGGCGTTGCCCTGGCTGCGGCCCTTAATAGCTGGCGAA
ATAAATGGCAGGGGGAAATACTTACCGCCGCAATACCAGATGCCATCGAACCCGAGCAGCCCTCAGACTTGGTTACAGCA
GACTTTACGAACTCCGGTTTATCCGAATCGCCGCTTTTGGTTGAGCCCCAATCAGCTTCTGAGCCTCAAGCTGACATGAA
TGACACGGGTGATAAAGCGTCGCAGTAG

Upstream 100 bases:

>100_bases
ATGGGGATTGGCCGCTGGGTATGGCACTTTACCCGCTGGTGAAAGCCAGCTCACACCTCTATAATGGCCGCCCGCCCCAG
CAGGGGTTTTGATCTTGTGG

Downstream 100 bases:

>100_bases
GCTTGATAATATGCCCGGCGCTAAAGGCTCGGCTGCGGGTAAAAAACAATTGGCCACATGGAGTGGCCATTGATCGGGGA
GATTTACAGCTTACTGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MCVLRKWLKGIAAVKFALIVLLGLSIWSTRIPDIAYHPVLPEQALANFHVIEFNDDGQMHLPAQFDALKARLRTTPGSNL
LIFIHGWHHNAAPTDDNFVAFQRFYRQMSATNPSLLGLYIGWRGDQYDPFWLDGSDDPDSVVEPLDFPTIFTSKRVAKQV
GERGVKPLLAELDTLADEGILGRYTLIGHSLGGVVALHARKQSLLENLAKGQGERHLTVLLNPAASAREYQPLDKWCSPD
NTGPAMLVLQSKTDYAVLEAFNWLKEGERAVGNSWAITHDIDPCPGRDCSRTLMLPKALQDHDAKPGCMQVLDGPGWKIR
ARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTEVQGVALAAALNSWRNKWQGEILTAAIPDAIEPEQPSDLVTA
DFTNSGLSESPLLVEPQSASEPQADMNDTGDKASQ

Sequences:

>Translated_435_residues
MCVLRKWLKGIAAVKFALIVLLGLSIWSTRIPDIAYHPVLPEQALANFHVIEFNDDGQMHLPAQFDALKARLRTTPGSNL
LIFIHGWHHNAAPTDDNFVAFQRFYRQMSATNPSLLGLYIGWRGDQYDPFWLDGSDDPDSVVEPLDFPTIFTSKRVAKQV
GERGVKPLLAELDTLADEGILGRYTLIGHSLGGVVALHARKQSLLENLAKGQGERHLTVLLNPAASAREYQPLDKWCSPD
NTGPAMLVLQSKTDYAVLEAFNWLKEGERAVGNSWAITHDIDPCPGRDCSRTLMLPKALQDHDAKPGCMQVLDGPGWKIR
ARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTEVQGVALAAALNSWRNKWQGEILTAAIPDAIEPEQPSDLVTA
DFTNSGLSESPLLVEPQSASEPQADMNDTGDKASQ
>Mature_435_residues
MCVLRKWLKGIAAVKFALIVLLGLSIWSTRIPDIAYHPVLPEQALANFHVIEFNDDGQMHLPAQFDALKARLRTTPGSNL
LIFIHGWHHNAAPTDDNFVAFQRFYRQMSATNPSLLGLYIGWRGDQYDPFWLDGSDDPDSVVEPLDFPTIFTSKRVAKQV
GERGVKPLLAELDTLADEGILGRYTLIGHSLGGVVALHARKQSLLENLAKGQGERHLTVLLNPAASAREYQPLDKWCSPD
NTGPAMLVLQSKTDYAVLEAFNWLKEGERAVGNSWAITHDIDPCPGRDCSRTLMLPKALQDHDAKPGCMQVLDGPGWKIR
ARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTEVQGVALAAALNSWRNKWQGEILTAAIPDAIEPEQPSDLVTA
DFTNSGLSESPLLVEPQSASEPQADMNDTGDKASQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47723; Mature: 47723

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVLRKWLKGIAAVKFALIVLLGLSIWSTRIPDIAYHPVLPEQALANFHVIEFNDDGQMH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCEEEEEECCCCCEE
LPAQFDALKARLRTTPGSNLLIFIHGWHHNAAPTDDNFVAFQRFYRQMSATNPSLLGLYI
CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
GWRGDQYDPFWLDGSDDPDSVVEPLDFPTIFTSKRVAKQVGERGVKPLLAELDTLADEGI
ECCCCCCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
LGRYTLIGHSLGGVVALHARKQSLLENLAKGQGERHLTVLLNPAASAREYQPLDKWCSPD
CEEHEEECCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCC
NTGPAMLVLQSKTDYAVLEAFNWLKEGERAVGNSWAITHDIDPCPGRDCSRTLMLPKALQ
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHCCCCHHHH
DHDAKPGCMQVLDGPGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTEV
HCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCHHHH
QGVALAAALNSWRNKWQGEILTAAIPDAIEPEQPSDLVTADFTNSGLSESPLLVEPQSAS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCC
EPQADMNDTGDKASQ
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MCVLRKWLKGIAAVKFALIVLLGLSIWSTRIPDIAYHPVLPEQALANFHVIEFNDDGQMH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCEEEEEECCCCCEE
LPAQFDALKARLRTTPGSNLLIFIHGWHHNAAPTDDNFVAFQRFYRQMSATNPSLLGLYI
CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
GWRGDQYDPFWLDGSDDPDSVVEPLDFPTIFTSKRVAKQVGERGVKPLLAELDTLADEGI
ECCCCCCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
LGRYTLIGHSLGGVVALHARKQSLLENLAKGQGERHLTVLLNPAASAREYQPLDKWCSPD
CEEHEEECCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCC
NTGPAMLVLQSKTDYAVLEAFNWLKEGERAVGNSWAITHDIDPCPGRDCSRTLMLPKALQ
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHCCCCHHHH
DHDAKPGCMQVLDGPGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTEV
HCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCHHHH
QGVALAAALNSWRNKWQGEILTAAIPDAIEPEQPSDLVTADFTNSGLSESPLLVEPQSAS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCC
EPQADMNDTGDKASQ
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA