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The map label for this gene is yhiX [C]

Identifier: 119775253

GI number: 119775253

Start: 2561847

End: 2562923

Strand: Reverse

Name: yhiX [C]

Synonym: Sama_2118

Alternate gene names: 119775253

Gene position: 2562923-2561847 (Counterclockwise)

Preceding gene: 119775254

Following gene: 119775247

Centisome position: 59.52

GC content: 56.73

Gene sequence:

>1077_bases
ATGAATATGTCGTTATCAAATTACCGTGCCGGTGCCATGGTGGGTGATCAGGGCTATCCTGCCTGGGAGCTGTTGCAGAT
CCTGTCAGCCATTCGACGGCTTTTTGGCGAGCAGGCCCACAGCGATGTGTGTGCCCGCCTCGGAGTGGCCCCCGAAGTGC
TTGGCCACATCACTCTGGTGCCCGTGTGGCAGGTCGATGGCGCCATGGAGGCTCTTTGTGCCCTCACTGATGACCGGGAA
ATAGGTATGCGGGCCGCGGCGGATTATCGCGTCAGTGAGCTTGGGTTTCTCAAAGGCCATCTTGCACGCTGCCAAACCTT
AGCAGATTGTTTCTATTTGCTGAATGACAATCCGGAATGGGCCGGCACCATGAATGACAGCCTGGTGACCCTGACCGGTG
GCAAGCTCAGGGTTCGCTGGATTAATACCCTGAGGATCCCGGATAGCCAGTTTCACTGCCACTTTCTTCATAGTTTGGGC
GCCCTGGTGGTACTCGGGCGAGAGCTTTGTGGTCAGGCGTTTCCGCTGGGCAGCATTGCCCTGACTGAGGCTTCTCACCC
CTGCGCTTTTATTGAGTCACTGTGCGGCGTTACTCCATCGTTTGGTGCACCTTTTTGCGAATGGACTGTGGATGCAGCCG
TGCTGGCGCTGCCCGTGAGCTATGCCTTTAGCGACGAAGAGCGCCGCGAGCCCGAATTGATACAGCCAAGTTATATCTAT
CAGGTGTTACAGCAACTTAAGATTTCCATGCCCGTATTGCCCACACTCAATGAATTGGCGGCGCGTTTGGGCACCAGCGA
GCGGACGCTCAGGCGAAAACTGGCCGAAAATGGCTGCAATTTTCAGCTGCTGCGGGATAAGGTGCGAAGTCAGGCGGCCA
TTGCATTAATCATTGAAGGCCGCCTGAGCGCCGAGGACATCGCTGAGTCCCTTGGCTTTACCGACGTTAGCCATTTCCGG
GCGAGTTTCAAGCATTGGTTGGGGGCGCCGCCGGGGAAGTTTCAGCGGCTTGTTGCCGGTTACCCCACTACTGACAGTTA
CCCACCGACGGGGCCATCAAGTCTATCCAGCGACTGA

Upstream 100 bases:

>100_bases
CCATTTAGGCTGAACACCCTAATGTCACTCTCTGTAGCCGGGGTTTTCTTCCTTCCCTAAATGGTATACAACTGGGCGTT
CGGGGGAATATCAGTCAATC

Downstream 100 bases:

>100_bases
TCTGCGTTACGGCTTCACTGTGCACCAAAGCTCGTCCCACTGGCGGCATGCGGTCTTTGGCCGCTGAAAGCGTCTGTCGA
TAGACCAGAATCGAGTGGTC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNMSLSNYRAGAMVGDQGYPAWELLQILSAIRRLFGEQAHSDVCARLGVAPEVLGHITLVPVWQVDGAMEALCALTDDRE
IGMRAAADYRVSELGFLKGHLARCQTLADCFYLLNDNPEWAGTMNDSLVTLTGGKLRVRWINTLRIPDSQFHCHFLHSLG
ALVVLGRELCGQAFPLGSIALTEASHPCAFIESLCGVTPSFGAPFCEWTVDAAVLALPVSYAFSDEERREPELIQPSYIY
QVLQQLKISMPVLPTLNELAARLGTSERTLRRKLAENGCNFQLLRDKVRSQAAIALIIEGRLSAEDIAESLGFTDVSHFR
ASFKHWLGAPPGKFQRLVAGYPTTDSYPPTGPSSLSSD

Sequences:

>Translated_358_residues
MNMSLSNYRAGAMVGDQGYPAWELLQILSAIRRLFGEQAHSDVCARLGVAPEVLGHITLVPVWQVDGAMEALCALTDDRE
IGMRAAADYRVSELGFLKGHLARCQTLADCFYLLNDNPEWAGTMNDSLVTLTGGKLRVRWINTLRIPDSQFHCHFLHSLG
ALVVLGRELCGQAFPLGSIALTEASHPCAFIESLCGVTPSFGAPFCEWTVDAAVLALPVSYAFSDEERREPELIQPSYIY
QVLQQLKISMPVLPTLNELAARLGTSERTLRRKLAENGCNFQLLRDKVRSQAAIALIIEGRLSAEDIAESLGFTDVSHFR
ASFKHWLGAPPGKFQRLVAGYPTTDSYPPTGPSSLSSD
>Mature_358_residues
MNMSLSNYRAGAMVGDQGYPAWELLQILSAIRRLFGEQAHSDVCARLGVAPEVLGHITLVPVWQVDGAMEALCALTDDRE
IGMRAAADYRVSELGFLKGHLARCQTLADCFYLLNDNPEWAGTMNDSLVTLTGGKLRVRWINTLRIPDSQFHCHFLHSLG
ALVVLGRELCGQAFPLGSIALTEASHPCAFIESLCGVTPSFGAPFCEWTVDAAVLALPVSYAFSDEERREPELIQPSYIY
QVLQQLKISMPVLPTLNELAARLGTSERTLRRKLAENGCNFQLLRDKVRSQAAIALIIEGRLSAEDIAESLGFTDVSHFR
ASFKHWLGAPPGKFQRLVAGYPTTDSYPPTGPSSLSSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39254; Mature: 39254

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSLSNYRAGAMVGDQGYPAWELLQILSAIRRLFGEQAHSDVCARLGVAPEVLGHITLV
CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEE
PVWQVDGAMEALCALTDDREIGMRAAADYRVSELGFLKGHLARCQTLADCFYLLNDNPEW
EEEECCHHHHHHHHHCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGTMNDSLVTLTGGKLRVRWINTLRIPDSQFHCHFLHSLGALVVLGRELCGQAFPLGSIA
CCCCCCCEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LTEASHPCAFIESLCGVTPSFGAPFCEWTVDAAVLALPVSYAFSDEERREPELIQPSYIY
ECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHH
QVLQQLKISMPVLPTLNELAARLGTSERTLRRKLAENGCNFQLLRDKVRSQAAIALIIEG
HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEEEC
RLSAEDIAESLGFTDVSHFRASFKHWLGAPPGKFQRLVAGYPTTDSYPPTGPSSLSSD
CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNMSLSNYRAGAMVGDQGYPAWELLQILSAIRRLFGEQAHSDVCARLGVAPEVLGHITLV
CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEE
PVWQVDGAMEALCALTDDREIGMRAAADYRVSELGFLKGHLARCQTLADCFYLLNDNPEW
EEEECCHHHHHHHHHCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGTMNDSLVTLTGGKLRVRWINTLRIPDSQFHCHFLHSLGALVVLGRELCGQAFPLGSIA
CCCCCCCEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
LTEASHPCAFIESLCGVTPSFGAPFCEWTVDAAVLALPVSYAFSDEERREPELIQPSYIY
ECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHH
QVLQQLKISMPVLPTLNELAARLGTSERTLRRKLAENGCNFQLLRDKVRSQAAIALIIEG
HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEEEC
RLSAEDIAESLGFTDVSHFRASFKHWLGAPPGKFQRLVAGYPTTDSYPPTGPSSLSSD
CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]