The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775237

Identifier: 119775237

GI number: 119775237

Start: 2548010

End: 2548204

Strand: Reverse

Name: 119775237

Synonym: Sama_2102

Alternate gene names: NA

Gene position: 2548204-2548010 (Counterclockwise)

Preceding gene: 119775238

Following gene: 119775231

Centisome position: 59.18

GC content: 52.82

Gene sequence:

>195_bases
ATGGATAAGTTACCGTCTCCCTGCGTTCGCAATTGCTGCCTGACCAATGAGGACATCTGTATGGGGTGTGGCCGCAGCTA
TCAGGAAATCCTCGATTGGCATCAGGCCAATACACACCGGCAGCAGTTGATACTGGAAAAAGCCAAAGTACGGTTGGAGG
AAATGGCTGAGATGCGTGGGCAGCCTCTGCGGTAA

Upstream 100 bases:

>100_bases
ATGGCCAAAGCCATCGATACCATGACTATTGAGGCATCCAGTCTCACCATGGAAGTGCGCGAGCTGGAAAAAGCACATTA
CTTTAAGAAGTTGGCCTGAA

Downstream 100 bases:

>100_bases
ACTCCGCTGGATTTTATTCACTCAGAAATACCAGCTCACAAGTAAAAGCCCCGTCTTCAGTGCGGGGCTTTTTGGTTATT
AGGCTGAGGTGTTTTTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MDKLPSPCVRNCCLTNEDICMGCGRSYQEILDWHQANTHRQQLILEKAKVRLEEMAEMRGQPLR

Sequences:

>Translated_64_residues
MDKLPSPCVRNCCLTNEDICMGCGRSYQEILDWHQANTHRQQLILEKAKVRLEEMAEMRGQPLR
>Mature_64_residues
MDKLPSPCVRNCCLTNEDICMGCGRSYQEILDWHQANTHRQQLILEKAKVRLEEMAEMRGQPLR

Specific function: Unknown

COG id: COG3313

COG function: function code R; Predicted Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7489; Mature: 7489

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
14.1 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
14.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLPSPCVRNCCLTNEDICMGCGRSYQEILDWHQANTHRQQLILEKAKVRLEEMAEMRG
CCCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
QPLR
CCCC
>Mature Secondary Structure
MDKLPSPCVRNCCLTNEDICMGCGRSYQEILDWHQANTHRQQLILEKAKVRLEEMAEMRG
CCCCCCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
QPLR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA