Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yceG [C]

Identifier: 119775179

GI number: 119775179

Start: 2480486

End: 2481460

Strand: Reverse

Name: yceG [C]

Synonym: Sama_2044

Alternate gene names: 119775179

Gene position: 2481460-2480486 (Counterclockwise)

Preceding gene: 119775180

Following gene: 119775178

Centisome position: 57.63

GC content: 53.64

Gene sequence:

>975_bases
ATGTCCCTGACTTTGCTCGGCGCCGCTACGGCGTTATGGGGTATGAAAGAGCTTGAAACCTTTGCCAACAGGCCTCTGAT
GCTTGAGCAGGCGAGGGAGCTGGAACTCAATCGGGGAACCAATGCCCGCGCATTGGGCAAAGAGTTGGTTGAGCAGGGAC
TCCTTGAAGGCTCATGGCATTACGATTGGTATCTGCGATTAAATCCCGCCATGGCGGGCATTCGTCAGGGGTTGTACGAA
ATCACCCCAGGCGACACGGTCAAGTCACTGCTTGAAAAGCTCATCAGCGGTAAAGTGAAGGACTTCGCAATCACTTTGGT
TGAAGGCCAAACGCTGCGGGAATGGCAGGCTAAGCTGGAAACTGCCCCCAGGCTGAATTGGGACGCGGATGTTTTCCATA
AGGTTCTCAAGGCGAACGGTGATGATTCCGGATTGCCGGAAGGGAAATTTTTTCCCGATACCTACAGCTATCCTGCCAAC
CAGGATGTGGAAACGCTGCTTACCCAGAGCTACCTGAAGATGCAGCAAGAGCTGGCAGCGGCCTGGCAGGTCAGAGCTCC
CGATTTACCTCTGGCGAGCGCCTATGAGCTGCTTATCCTGGCGTCCATTATAGAGAAAGAGACCGGCAAGGCCGAGGAGC
GCCCCTTGATTGCTGCGGTGTTTATCAACCGGCTGCGAAAGGGAATGCGACTGCAGACAGACCCCACGGTGATTTATGGC
ATGGGAACGCGCTTTAACGGCAATATCACCCGTAAAGATCTGCGTGAGGATACGCCCTTCAACACCTATCGCATTCAAGG
ACTGCCACCTACGCCTATTGCGGCACCCGGACGTGAAGCCTTGATGGCGGCGGCACAACCGGCACAATCAGATTATCTTT
ACTTTGTGTCCAGAAACGATGGCAGCCACGTATTTTCCCGCACACTCGCTGAACACAATCGCGCAGTAAACCAATTTCAG
AGAAAACAAAAATGA

Upstream 100 bases:

>100_bases
ATAACTTTCATTATCAGGTTTTTACTGAAAGCCAGAGCATTCGCGATGCGCTGGAATTGAATTTATGAAGAGAATTCTCA
TTGGGATAGTTGGGGCGATT

Downstream 100 bases:

>100_bases
CGCAGAATCCCGGTAAATTCATTGTGATTGAGGGGCTTGAAGGCGCAGGTAAGTCCAGTGCCATCACACTGGTACATGAC
TTTATCGAGAAGCACACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSLTLLGAATALWGMKELETFANRPLMLEQARELELNRGTNARALGKELVEQGLLEGSWHYDWYLRLNPAMAGIRQGLYE
ITPGDTVKSLLEKLISGKVKDFAITLVEGQTLREWQAKLETAPRLNWDADVFHKVLKANGDDSGLPEGKFFPDTYSYPAN
QDVETLLTQSYLKMQQELAAAWQVRAPDLPLASAYELLILASIIEKETGKAEERPLIAAVFINRLRKGMRLQTDPTVIYG
MGTRFNGNITRKDLREDTPFNTYRIQGLPPTPIAAPGREALMAAAQPAQSDYLYFVSRNDGSHVFSRTLAEHNRAVNQFQ
RKQK

Sequences:

>Translated_324_residues
MSLTLLGAATALWGMKELETFANRPLMLEQARELELNRGTNARALGKELVEQGLLEGSWHYDWYLRLNPAMAGIRQGLYE
ITPGDTVKSLLEKLISGKVKDFAITLVEGQTLREWQAKLETAPRLNWDADVFHKVLKANGDDSGLPEGKFFPDTYSYPAN
QDVETLLTQSYLKMQQELAAAWQVRAPDLPLASAYELLILASIIEKETGKAEERPLIAAVFINRLRKGMRLQTDPTVIYG
MGTRFNGNITRKDLREDTPFNTYRIQGLPPTPIAAPGREALMAAAQPAQSDYLYFVSRNDGSHVFSRTLAEHNRAVNQFQ
RKQK
>Mature_323_residues
SLTLLGAATALWGMKELETFANRPLMLEQARELELNRGTNARALGKELVEQGLLEGSWHYDWYLRLNPAMAGIRQGLYEI
TPGDTVKSLLEKLISGKVKDFAITLVEGQTLREWQAKLETAPRLNWDADVFHKVLKANGDDSGLPEGKFFPDTYSYPANQ
DVETLLTQSYLKMQQELAAAWQVRAPDLPLASAYELLILASIIEKETGKAEERPLIAAVFINRLRKGMRLQTDPTVIYGM
GTRFNGNITRKDLREDTPFNTYRIQGLPPTPIAAPGREALMAAAQPAQSDYLYFVSRNDGSHVFSRTLAEHNRAVNQFQR
KQK

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=317, Percent_Identity=41.3249211356467, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 36454; Mature: 36323

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTLLGAATALWGMKELETFANRPLMLEQARELELNRGTNARALGKELVEQGLLEGSWH
CCEEEHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
YDWYLRLNPAMAGIRQGLYEITPGDTVKSLLEKLISGKVKDFAITLVEGQTLREWQAKLE
EEEEEEECHHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH
TAPRLNWDADVFHKVLKANGDDSGLPEGKFFPDTYSYPANQDVETLLTQSYLKMQQELAA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AWQVRAPDLPLASAYELLILASIIEKETGKAEERPLIAAVFINRLRKGMRLQTDPTVIYG
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCEECCCCEEEEE
MGTRFNGNITRKDLREDTPFNTYRIQGLPPTPIAAPGREALMAAAQPAQSDYLYFVSRND
CCCEECCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCC
GSHVFSRTLAEHNRAVNQFQRKQK
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLTLLGAATALWGMKELETFANRPLMLEQARELELNRGTNARALGKELVEQGLLEGSWH
CEEEHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
YDWYLRLNPAMAGIRQGLYEITPGDTVKSLLEKLISGKVKDFAITLVEGQTLREWQAKLE
EEEEEEECHHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHH
TAPRLNWDADVFHKVLKANGDDSGLPEGKFFPDTYSYPANQDVETLLTQSYLKMQQELAA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AWQVRAPDLPLASAYELLILASIIEKETGKAEERPLIAAVFINRLRKGMRLQTDPTVIYG
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCEECCCCEEEEE
MGTRFNGNITRKDLREDTPFNTYRIQGLPPTPIAAPGREALMAAAQPAQSDYLYFVSRND
CCCEECCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCC
GSHVFSRTLAEHNRAVNQFQRKQK
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]