Click here to switch to the map view.

The map label for this gene is 119775176

Identifier: 119775176

GI number: 119775176

Start: 2478603

End: 2478929

Strand: Reverse

Name: 119775176

Synonym: Sama_2041

Alternate gene names: NA

Gene position: 2478929-2478603 (Counterclockwise)

Preceding gene: 119775177

Following gene: 119775175

Centisome position: 57.57

GC content: 52.6

Gene sequence:

>327_bases
ATGGTAGATCTGGTGGTTAACTTCGATACCCTGCATCAGCTGTATCGTGCCTATATGCCTTTTATCAAGCCGGCGGGGCT
CTTTGTTTCCACCAGCGAAAGCCATTTTCTTGGGCAGGAAATGACAGTGGCTTATCGACTCCCGGGTGCCACCACGGTGC
ATCAACTCAAGGGCATAGTGGTTTGGATAAACCCTGTCGGAGCCTCCGGTGGTCGTCCTCCCGGCGTTGGTCTCAAAATC
GTTTCCGATGCCGATACCCACAAGCATCATATCGAAAATCTGCTTTCCAGAGAGCTCGCGTCCGCCGATTTGACCTGTAC
CATGTAG

Upstream 100 bases:

>100_bases
GAGCGTTTGTCATACGTTAAGTACTATGCCGAGCGTCAATTATCTGGCACTATGTCAAAAGATTGTTTCAGAATATCAGA
GAATAAAAGAAAACTAGCCT

Downstream 100 bases:

>100_bases
GCCGCTATCCTTGCCATCTTTTTCACTATTGGCAGGATCCTCACTTTGCTTATCGATTCCCATTGTCACCTCGACAGATT
AAAAGCCGCCCCCTGTGATG

Product: type IV pilus biogenesis protein pilZ

Products: NA

Alternate protein names: Type IV Pilus Assembly PilZ; Type 4 Fimbrial Biogenesis Protein PilZ; Type IV Fimbriae Assembly Protein; Type 4 Fimbrial Biogenesis Protein PILZ; Pilus Biogenesis Protein PilZ; Type IV Fimbrial Biogenesis Protein PilZ; Tfp Pilus Assembly Protein; Tfp Pilus Assembly Protein PilZ

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVSTSESHFLGQEMTVAYRLPGATTVHQLKGIVVWINPVGASGGRPPGVGLKI
VSDADTHKHHIENLLSRELASADLTCTM

Sequences:

>Translated_108_residues
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVSTSESHFLGQEMTVAYRLPGATTVHQLKGIVVWINPVGASGGRPPGVGLKI
VSDADTHKHHIENLLSRELASADLTCTM
>Mature_108_residues
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVSTSESHFLGQEMTVAYRLPGATTVHQLKGIVVWINPVGASGGRPPGVGLKI
VSDADTHKHHIENLLSRELASADLTCTM

Specific function: Unknown

COG id: COG3215

COG function: function code NU; Tfp pilus assembly protein PilZ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11787; Mature: 11787

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVSTSESHFLGQEMTVAYRLPGATTVHQLKGIV
CEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHCEEE
VWINPVGASGGRPPGVGLKIVSDADTHKHHIENLLSRELASADLTCTM
EEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MVDLVVNFDTLHQLYRAYMPFIKPAGLFVSTSESHFLGQEMTVAYRLPGATTVHQLKGIV
CEEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHCEEE
VWINPVGASGGRPPGVGLKIVSDADTHKHHIENLLSRELASADLTCTM
EEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA