| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is cheV [H]
Identifier: 119775167
GI number: 119775167
Start: 2470301
End: 2471317
Strand: Reverse
Name: cheV [H]
Synonym: Sama_2032
Alternate gene names: 119775167
Gene position: 2471317-2470301 (Counterclockwise)
Preceding gene: 119775169
Following gene: 119775164
Centisome position: 57.39
GC content: 50.25
Gene sequence:
>1017_bases GTGTTGAATAAATTACCCGGCTGCTCTTTTGTGATAGTGGGCGCCGCAGAACATCATCGAGAGACCGCGTTTATGGCCAA AATATTGGAAACTGTCGATCAGCGTACCCAACTGGTAGGGGAGAATCGGCTTGAGCTGTTGCTGTTTCGGCTGAATTCCA CACAACTTTTTGCCATCAATGTGTTTAAAGTCAAAGAGGTGGTTAAGCTGCCCCCGCTTAATGCCATGCCGGGCTCCCAT CCCAGTATCAGCGGTGTGGCCAATATTCGGGGTGTTTCCATACCAGTGATTAATCTGCGTCAGGCCATAGGTTTTCAGCC CATGCCGGCTGAGGCCGATGCGAATCTTATCATCACCGAATATAACCGCTCGGTGCAGGGCTTTTTGGTGGGGAAGGTTG AACATATCGTCAATATGACCTGGGGCGATATAATGCCGCCGCCCAAAACGGCCGGGCGCAATAACTATCTCACCGCGATT ACCCGCCTTGACTATCAGGGGGTGTCAAATCTGGTCTCCATCATCGATGTGGAGAAAGTTCTTGCCGAAATTATCCACTA CGATGTGCGTTTATCTGAAGGGGTGTTGGATGAATCGCTGCTTGCAAAAATGCCTGGGCACAAACTCCTGGTGGTGGACG ATTCTGCCACCGCCCGCAAACAGGTGAAGGAAACTCTGGGTCAGTTGGGCATTGAAATACTTGAGGTGAGTGACGGACGA GAGGCGCTGGAGCTATTGAAAGGCTGGGCTGACGAAGGGATGAATGTGCCCAAAGAGCTTTTGATGATGATAACCGATGC CGAAATGCCTGAAATGGATGGTTATAAGTTGACCTTTGAAGTCAGAAACGACCCGCGCCTGAAAGACCTCTACATTACCC TCAACACGTCACTCAGCGGCAGTTTTAATAATGCCATGGTGGAAAAAGTGGGCTGTGATCAGTTTATCTCCAAGTTCCAA CCCGACAGGTTGGTTGAAGTGGTTCAGGACAGACTGCGCAACGTCATCAAGGCGTAA
Upstream 100 bases:
>100_bases ATACGTAAATCGGTGTGAAAAGATCACTCCGGGCGCTTTATCCATCCCCAATATTGCGCCAGAGCATGGTTGATGAAAAC TGAAACGCCTATAATTTAAC
Downstream 100 bases:
>100_bases CTTAGCAAGCGTTTACCCAGTGCTGAATATGCGGATTTTTTTCCGCCGCCAGCGGCTACTTCCTATATGGCAGGAAGCTG TGTTGGGTTCACTCAGAGCT
Product: chemotaxis protein CheV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLNKLPGCSFVIVGAAEHHRETAFMAKILETVDQRTQLVGENRLELLLFRLNSTQLFAINVFKVKEVVKLPPLNAMPGSH PSISGVANIRGVSIPVINLRQAIGFQPMPAEADANLIITEYNRSVQGFLVGKVEHIVNMTWGDIMPPPKTAGRNNYLTAI TRLDYQGVSNLVSIIDVEKVLAEIIHYDVRLSEGVLDESLLAKMPGHKLLVVDDSATARKQVKETLGQLGIEILEVSDGR EALELLKGWADEGMNVPKELLMMITDAEMPEMDGYKLTFEVRNDPRLKDLYITLNTSLSGSFNNAMVEKVGCDQFISKFQ PDRLVEVVQDRLRNVIKA
Sequences:
>Translated_338_residues MLNKLPGCSFVIVGAAEHHRETAFMAKILETVDQRTQLVGENRLELLLFRLNSTQLFAINVFKVKEVVKLPPLNAMPGSH PSISGVANIRGVSIPVINLRQAIGFQPMPAEADANLIITEYNRSVQGFLVGKVEHIVNMTWGDIMPPPKTAGRNNYLTAI TRLDYQGVSNLVSIIDVEKVLAEIIHYDVRLSEGVLDESLLAKMPGHKLLVVDDSATARKQVKETLGQLGIEILEVSDGR EALELLKGWADEGMNVPKELLMMITDAEMPEMDGYKLTFEVRNDPRLKDLYITLNTSLSGSFNNAMVEKVGCDQFISKFQ PDRLVEVVQDRLRNVIKA >Mature_338_residues MLNKLPGCSFVIVGAAEHHRETAFMAKILETVDQRTQLVGENRLELLLFRLNSTQLFAINVFKVKEVVKLPPLNAMPGSH PSISGVANIRGVSIPVINLRQAIGFQPMPAEADANLIITEYNRSVQGFLVGKVEHIVNMTWGDIMPPPKTAGRNNYLTAI TRLDYQGVSNLVSIIDVEKVLAEIIHYDVRLSEGVLDESLLAKMPGHKLLVVDDSATARKQVKETLGQLGIEILEVSDGR EALELLKGWADEGMNVPKELLMMITDAEMPEMDGYKLTFEVRNDPRLKDLYITLNTSLSGSFNNAMVEKVGCDQFISKFQ PDRLVEVVQDRLRNVIKA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 37589; Mature: 37589
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKLPGCSFVIVGAAEHHRETAFMAKILETVDQRTQLVGENRLELLLFRLNSTQLFAIN CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEE VFKVKEVVKLPPLNAMPGSHPSISGVANIRGVSIPVINLRQAIGFQPMPAEADANLIITE HHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEE YNRSVQGFLVGKVEHIVNMTWGDIMPPPKTAGRNNYLTAITRLDYQGVSNLVSIIDVEKV CCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHH LAEIIHYDVRLSEGVLDESLLAKMPGHKLLVVDDSATARKQVKETLGQLGIEILEVSDGR HHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCH EALELLKGWADEGMNVPKELLMMITDAEMPEMDGYKLTFEVRNDPRLKDLYITLNTSLSG HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCC SFNNAMVEKVGCDQFISKFQPDRLVEVVQDRLRNVIKA CCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNKLPGCSFVIVGAAEHHRETAFMAKILETVDQRTQLVGENRLELLLFRLNSTQLFAIN CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEE VFKVKEVVKLPPLNAMPGSHPSISGVANIRGVSIPVINLRQAIGFQPMPAEADANLIITE HHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEE YNRSVQGFLVGKVEHIVNMTWGDIMPPPKTAGRNNYLTAITRLDYQGVSNLVSIIDVEKV CCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHH LAEIIHYDVRLSEGVLDESLLAKMPGHKLLVVDDSATARKQVKETLGQLGIEILEVSDGR HHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCH EALELLKGWADEGMNVPKELLMMITDAEMPEMDGYKLTFEVRNDPRLKDLYITLNTSLSG HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCC SFNNAMVEKVGCDQFISKFQPDRLVEVVQDRLRNVIKA CCCHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]