| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is eamB [H]
Identifier: 119775150
GI number: 119775150
Start: 2449561
End: 2450169
Strand: Reverse
Name: eamB [H]
Synonym: Sama_2015
Alternate gene names: 119775150
Gene position: 2450169-2449561 (Counterclockwise)
Preceding gene: 119775155
Following gene: 119775149
Centisome position: 56.9
GC content: 55.01
Gene sequence:
>609_bases ATGGAAATGACCCTGACGGCATTGACCCTCTCTGCCGCTGTATTTTGCGCCACTATGACCATGACCCCCGGCCCCAACAA CCTGTTACTGGCCCAGTCAGGGGCAACCTTCGGTGTGCGTCAAAGTGTTCGCCATATTGTCGGGATAAGGTTGGGCACAA CCTCACTGCATCTGGCCATGCTGCTTGGGCTCGGCGCCTTGTTTGAAGGGTTCCCGCTGCTGCATCAGTTCCTTAAAACC GTGTCACTGGCGTATCTTTTATGGCTTGCCTTTAAAATTGCCACCGCGCCTACCGCGGAGCAATCTGCATCCCAGCGGAT TAAGCCCATGGGACTCATGGAAGCGGCAATGTTCCAATGGATCAATCCCAAGAGTTGGCTCGCCGTGATGACACTGTGCA GCGCTTTTACACTCGCGGGAGACCAGTACTGGCTCAGTGCGCTGGTGATGGTGCTGGTATTTAACATAGTTGGATTGCCG GCATCTTTTACCTGGGTGGTCTTGGGGCAAGCCATTGGCCGTTTTTTGCACACGCCGGGGCGTCAGCGTACGTTTAACCA GCTGATGGCGCTGGCCTTGCTGCTGACGTTGCCAATGATACTGATGTAG
Upstream 100 bases:
>100_bases TGACAATATTCCGATTGATCTGTTTTGTTGGGGCTATAGTATGGCAATAATTGCTCGGAATCACCCTTTTATTGTATCCA TACAATTTGGAGTTTGTTTC
Downstream 100 bases:
>100_bases TCAATGGATTTATTTTTACTGGCAGGGATAGACAAACTAAGCTAATTCAACGATAAGGCAGGGAATGGATGAATCGAAAG GAGTCTGTGTGTCTCGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MEMTLTALTLSAAVFCATMTMTPGPNNLLLAQSGATFGVRQSVRHIVGIRLGTTSLHLAMLLGLGALFEGFPLLHQFLKT VSLAYLLWLAFKIATAPTAEQSASQRIKPMGLMEAAMFQWINPKSWLAVMTLCSAFTLAGDQYWLSALVMVLVFNIVGLP ASFTWVVLGQAIGRFLHTPGRQRTFNQLMALALLLTLPMILM
Sequences:
>Translated_202_residues MEMTLTALTLSAAVFCATMTMTPGPNNLLLAQSGATFGVRQSVRHIVGIRLGTTSLHLAMLLGLGALFEGFPLLHQFLKT VSLAYLLWLAFKIATAPTAEQSASQRIKPMGLMEAAMFQWINPKSWLAVMTLCSAFTLAGDQYWLSALVMVLVFNIVGLP ASFTWVVLGQAIGRFLHTPGRQRTFNQLMALALLLTLPMILM >Mature_202_residues MEMTLTALTLSAAVFCATMTMTPGPNNLLLAQSGATFGVRQSVRHIVGIRLGTTSLHLAMLLGLGALFEGFPLLHQFLKT VSLAYLLWLAFKIATAPTAEQSASQRIKPMGLMEAAMFQWINPKSWLAVMTLCSAFTLAGDQYWLSALVMVLVFNIVGLP ASFTWVVLGQAIGRFLHTPGRQRTFNQLMALALLLTLPMILM
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=178, Percent_Identity=35.3932584269663, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 22030; Mature: 22030
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMTLTALTLSAAVFCATMTMTPGPNNLLLAQSGATFGVRQSVRHIVGIRLGTTSLHLAM CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH LLGLGALFEGFPLLHQFLKTVSLAYLLWLAFKIATAPTAEQSASQRIKPMGLMEAAMFQW HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH INPKSWLAVMTLCSAFTLAGDQYWLSALVMVLVFNIVGLPASFTWVVLGQAIGRFLHTPG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC RQRTFNQLMALALLLTLPMILM CHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEMTLTALTLSAAVFCATMTMTPGPNNLLLAQSGATFGVRQSVRHIVGIRLGTTSLHLAM CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHH LLGLGALFEGFPLLHQFLKTVSLAYLLWLAFKIATAPTAEQSASQRIKPMGLMEAAMFQW HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH INPKSWLAVMTLCSAFTLAGDQYWLSALVMVLVFNIVGLPASFTWVVLGQAIGRFLHTPG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC RQRTFNQLMALALLLTLPMILM CHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA