The gene/protein map for NC_008709 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119775148

Identifier: 119775148

GI number: 119775148

Start: 2447479

End: 2447676

Strand: Direct

Name: 119775148

Synonym: Sama_2013

Alternate gene names: NA

Gene position: 2447479-2447676 (Clockwise)

Preceding gene: 119775147

Following gene: 119775151

Centisome position: 56.84

GC content: 45.96

Gene sequence:

>198_bases
ATGGAAATCACCATCTTGTTGCTGTTGCTGCTATTGGTAGCGCTGCATTGTCTTTTTGGATACAAGGCTCTGTGCAGTGA
AGCCAAAATCAGTCAGGGGCAAAAATGCCTCTGGTGCGCATTGAGTCTTGGATTGGGTCCTGCCGGTTATTATTTTTATC
AAGGGCTTATCCCCTGCGATATGCTTGGCAGAGATTAA

Upstream 100 bases:

>100_bases
TCGTCAGGTAAATTAGTGCGATAAAAACGGAACCTGCTGTTATTTTGGGGAAAACGCAAGAAGCGTCACCTTAACGGACT
TGTTTTAAGGTATTGAGTAT

Downstream 100 bases:

>100_bases
TCCTGTTGTACAAAAAAGCCCCGGGTTCCGGGGCTTTTTTGTTACAGATGGCTGTGTTCCAGCACCAGGTCCAAATCCAC
AGGTCGCTTGAGTACCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MEITILLLLLLLVALHCLFGYKALCSEAKISQGQKCLWCALSLGLGPAGYYFYQGLIPCDMLGRD

Sequences:

>Translated_65_residues
MEITILLLLLLLVALHCLFGYKALCSEAKISQGQKCLWCALSLGLGPAGYYFYQGLIPCDMLGRD
>Mature_65_residues
MEITILLLLLLLVALHCLFGYKALCSEAKISQGQKCLWCALSLGLGPAGYYFYQGLIPCDMLGRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7154; Mature: 7154

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITILLLLLLLVALHCLFGYKALCSEAKISQGQKCLWCALSLGLGPAGYYFYQGLIPCD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCC
MLGRD
CCCCC
>Mature Secondary Structure
MEITILLLLLLLVALHCLFGYKALCSEAKISQGQKCLWCALSLGLGPAGYYFYQGLIPCD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCC
MLGRD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA