The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is chvI [H]

Identifier: 119775140

GI number: 119775140

Start: 2435671

End: 2436366

Strand: Direct

Name: chvI [H]

Synonym: Sama_2005

Alternate gene names: 119775140

Gene position: 2435671-2436366 (Clockwise)

Preceding gene: 119775136

Following gene: 119775141

Centisome position: 56.56

GC content: 54.02

Gene sequence:

>696_bases
ATGAAACGAATTGCCATCGTCGAAGATGAAGCCGCCATCCGCGAAAACTACAAAGATGTGCTCCAGTCCCATGGATATCT
GGTGCAAACCTTTGCCAATCGTCCCGATGCCATGCTGGCGTTTCAAACCCGGCTGCCGGATTTGGCCATTATAGATATTG
GTCTTGGGGACGAAATCGATGGCGGTTTTACCCTGTGTCAGGGACTCAGAGCCCTGTCGCCCACCATTCCCATCATCTTT
TTGACCGCCCGCGACAGTGACTTTGATACCGTCACAGGCCTTCGGCTGGGGGCGGACGACTATTTGTCCAAAGAAGTGAG
TTTTCCACATCTGCTGGCTAGGCTGGCCGCGCTGTTTCGCCGCTGTGAACAGCTTAAAGCGCCGGCTACACCGGATAATC
TGCTTACCCGTGGGCACCTGACCATAGATGCCAATCGCATTCAGGTGTACTGGCGCGATTTGCCGATTGAACTGACGGTG
ACCGAATTTTGGATGGTGCATGCTCTTGCCCGCCACCCGGGCCATGTGAAGAGCCGCACCGAACTGATGCAGGAAGCGAA
AATCTACGTCGATGACAGCACCATCACCAGCCATGTAAAGCGCATTCGCAAAAAATTCATCGCGGCCGACACCGAGTTTG
ATTGCATCGACACCGTCTATGGCATGGGCTATCGATGGGACAGCCAGAGTTCATGA

Upstream 100 bases:

>100_bases
GCCCCAGACTTTCAATGGGGCTAAATTGCTGTATAGTCAGCCATAGATTGAATTAGCCCCTGCAAAAACTGGCCTAGCGC
CCGCTGTATTGAGTCACGCC

Downstream 100 bases:

>100_bases
TCCGCCTGCCATTGGGTCTTCGCGCCAAAGTCGTTATTCTCTCACTGTTTTTGCTGTGCCTGCCCTGGCTTGGCTATCAA
TATGTGTGGGAGATGGAAAA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKRIAIVEDEAAIRENYKDVLQSHGYLVQTFANRPDAMLAFQTRLPDLAIIDIGLGDEIDGGFTLCQGLRALSPTIPIIF
LTARDSDFDTVTGLRLGADDYLSKEVSFPHLLARLAALFRRCEQLKAPATPDNLLTRGHLTIDANRIQVYWRDLPIELTV
TEFWMVHALARHPGHVKSRTELMQEAKIYVDDSTITSHVKRIRKKFIAADTEFDCIDTVYGMGYRWDSQSS

Sequences:

>Translated_231_residues
MKRIAIVEDEAAIRENYKDVLQSHGYLVQTFANRPDAMLAFQTRLPDLAIIDIGLGDEIDGGFTLCQGLRALSPTIPIIF
LTARDSDFDTVTGLRLGADDYLSKEVSFPHLLARLAALFRRCEQLKAPATPDNLLTRGHLTIDANRIQVYWRDLPIELTV
TEFWMVHALARHPGHVKSRTELMQEAKIYVDDSTITSHVKRIRKKFIAADTEFDCIDTVYGMGYRWDSQSS
>Mature_231_residues
MKRIAIVEDEAAIRENYKDVLQSHGYLVQTFANRPDAMLAFQTRLPDLAIIDIGLGDEIDGGFTLCQGLRALSPTIPIIF
LTARDSDFDTVTGLRLGADDYLSKEVSFPHLLARLAALFRRCEQLKAPATPDNLLTRGHLTIDANRIQVYWRDLPIELTV
TEFWMVHALARHPGHVKSRTELMQEAKIYVDDSTITSHVKRIRKKFIAADTEFDCIDTVYGMGYRWDSQSS

Specific function: Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=35.3982300884956, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=35.4700854700855, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=32.618025751073, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=33.0434782608696, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=30.7017543859649, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=33.0396475770925, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1786911, Length=231, Percent_Identity=31.6017316017316, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=30.3964757709251, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367329, Length=164, Percent_Identity=35.9756097560976, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=27.8260869565217, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=32.8947368421053, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=31.1965811965812, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26183; Mature: 26183

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIAIVEDEAAIRENYKDVLQSHGYLVQTFANRPDAMLAFQTRLPDLAIIDIGLGDEID
CCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCC
GGFTLCQGLRALSPTIPIIFLTARDSDFDTVTGLRLGADDYLSKEVSFPHLLARLAALFR
CHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCEEECCHHHHHHCCCHHHHHHHHHHHHH
RCEQLKAPATPDNLLTRGHLTIDANRIQVYWRDLPIELTVTEFWMVHALARHPGHVKSRT
HHHHHCCCCCCHHHEECCEEEEECCEEEEEEECCCEEEEHHHHHHHHHHHHCCCCCHHHH
ELMQEAKIYVDDSTITSHVKRIRKKFIAADTEFDCIDTVYGMGYRWDSQSS
HHHHHCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRIAIVEDEAAIRENYKDVLQSHGYLVQTFANRPDAMLAFQTRLPDLAIIDIGLGDEID
CCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCC
GGFTLCQGLRALSPTIPIIFLTARDSDFDTVTGLRLGADDYLSKEVSFPHLLARLAALFR
CHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCEEECCHHHHHHCCCHHHHHHHHHHHHH
RCEQLKAPATPDNLLTRGHLTIDANRIQVYWRDLPIELTVTEFWMVHALARHPGHVKSRT
HHHHHCCCCCCHHHEECCEEEEECCEEEEEEECCCEEEEHHHHHHHHHHHHCCCCCHHHH
ELMQEAKIYVDDSTITSHVKRIRKKFIAADTEFDCIDTVYGMGYRWDSQSS
HHHHHCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559334 [H]