| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is hisI [H]
Identifier: 119775083
GI number: 119775083
Start: 2375532
End: 2376158
Strand: Direct
Name: hisI [H]
Synonym: Sama_1948
Alternate gene names: 119775083
Gene position: 2375532-2376158 (Clockwise)
Preceding gene: 119775082
Following gene: 119775089
Centisome position: 55.17
GC content: 55.66
Gene sequence:
>627_bases ATGGCTGACGAAACCCTTTTAAACCGTCTCGATTGGGACAAACAAGACGGGCTCATCCCCGCCATCGTGCAAAACCATTT AAGCGGCAAGGTGCTGATGCAGGGCTATATGGACAAGGCCGCGCTGGAAAAGACCCTGCAAACCGGCATGGTGACCTTTT TCAGTCGCAGCAAGCAGCGACTGTGGACCAAGGGCGAGTCATCCGGCAATGTGCTTAGCCTTATCAGCATCGCCGCCGAT TGCGACAATGACAGCCTCTTGGTGCAGGTTCTGCCCAAAGGCCCCACCTGCCATACAGGGACCGAGTCTTGCTGGCAAGA TGGCAGCCACAGCTTTATTGCCGGGCTCGAGAGCTTAATTCAGGGTAGGAAAAAAGCCTGTGGTGCCGGCGAAGGCGGCA GCAGTTATACGGCATCCCTGTTTGCCAGTGGCACCAAGCGCATGGCGCAAAAAGTGGGTGAAGAAGGGCTGGAGACGGCG CTCGCCGCCGCAACCCACGATAAAGAAGAGCTGGTAGATGAAGCATCGGATTTGCTGTTTCACCTGATGGTACTGCTGGA GGACCAGGGGCTGTCCCTTGCGGATATCACCGAAAATCTCTATAAGCGTCATCAGGCCAGAAGCTAA
Upstream 100 bases:
>100_bases TGCCGCAAGCGTGTTTCATAAAGGCATCATCAATATTGGTGAGCTTAAACAATTCCTTGTATCACAGGGGATTGCCATCA GGTTAACGGAGTAATGGCCC
Downstream 100 bases:
>100_bases GACTCTGGTTTCCACCCACGTAAAAACGCTGCCATGGCAGCGTTTTTTGTTTGTCTTTTCAAATGGTATTTCTTTCGTCC GACACCGACGGTGACCGCTA
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MADETLLNRLDWDKQDGLIPAIVQNHLSGKVLMQGYMDKAALEKTLQTGMVTFFSRSKQRLWTKGESSGNVLSLISIAAD CDNDSLLVQVLPKGPTCHTGTESCWQDGSHSFIAGLESLIQGRKKACGAGEGGSSYTASLFASGTKRMAQKVGEEGLETA LAAATHDKEELVDEASDLLFHLMVLLEDQGLSLADITENLYKRHQARS
Sequences:
>Translated_208_residues MADETLLNRLDWDKQDGLIPAIVQNHLSGKVLMQGYMDKAALEKTLQTGMVTFFSRSKQRLWTKGESSGNVLSLISIAAD CDNDSLLVQVLPKGPTCHTGTESCWQDGSHSFIAGLESLIQGRKKACGAGEGGSSYTASLFASGTKRMAQKVGEEGLETA LAAATHDKEELVDEASDLLFHLMVLLEDQGLSLADITENLYKRHQARS >Mature_207_residues ADETLLNRLDWDKQDGLIPAIVQNHLSGKVLMQGYMDKAALEKTLQTGMVTFFSRSKQRLWTKGESSGNVLSLISIAADC DNDSLLVQVLPKGPTCHTGTESCWQDGSHSFIAGLESLIQGRKKACGAGEGGSSYTASLFASGTKRMAQKVGEEGLETAL AAATHDKEELVDEASDLLFHLMVLLEDQGLSLADITENLYKRHQARS
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=207, Percent_Identity=61.3526570048309, Blast_Score=258, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6319819, Length=206, Percent_Identity=33.495145631068, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 22531; Mature: 22400
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADETLLNRLDWDKQDGLIPAIVQNHLSGKVLMQGYMDKAALEKTLQTGMVTFFSRSKQR CCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTKGESSGNVLSLISIAADCDNDSLLVQVLPKGPTCHTGTESCWQDGSHSFIAGLESLI HHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHH QGRKKACGAGEGGSSYTASLFASGTKRMAQKVGEEGLETALAAATHDKEELVDEASDLLF HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH HLMVLLEDQGLSLADITENLYKRHQARS HHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ADETLLNRLDWDKQDGLIPAIVQNHLSGKVLMQGYMDKAALEKTLQTGMVTFFSRSKQR CCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTKGESSGNVLSLISIAADCDNDSLLVQVLPKGPTCHTGTESCWQDGSHSFIAGLESLI HHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHH QGRKKACGAGEGGSSYTASLFASGTKRMAQKVGEEGLETALAAATHDKEELVDEASDLLF HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH HLMVLLEDQGLSLADITENLYKRHQARS HHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]