Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775071

Identifier: 119775071

GI number: 119775071

Start: 2363746

End: 2364576

Strand: Reverse

Name: 119775071

Synonym: Sama_1936

Alternate gene names: NA

Gene position: 2364576-2363746 (Counterclockwise)

Preceding gene: 119775072

Following gene: 119775070

Centisome position: 54.91

GC content: 52.83

Gene sequence:

>831_bases
ATGTATTTCAAGGAGAACATGATGAAAAAATTGCTGGTAGCGGGCCTGGTATCCTGGGCCGGACTGACAGGGATGGCACA
TGCCATGACATTGGAAGAGGCGGCTCTAAACAGTCTGCGTACACCCGCCAATGTTGAGCGCGATCAGTATCGTCATCCTG
TTGAGACGCTGAGCTTTTTCGGTGTAAAGGACAACCTAACCGTGGTGGAGTTCTGGCCCGGTGGCGGCTGGTATACTGAA
ATTCTGGCACCATTGCTTAATGAAAATGGCCAGTATGTCGCTGCGAATTTTGAAACCAACCCCGCCCCCGAGGCTAATAG
CCCTGCCTATCGTATTCGTCTCGGTAAGGCGCTGGAAGGCTGGCTCGAAACCCATGCCGATAAGGTAGGGAATGCGAAAA
CTGTAACCTTCGACCCTCCTCATAAAACGTCATTGGGTGAAAGCGGTAGCGCCGATGTGGTGCTGACGTTCCGCAACATG
CATAACTGGGCTATGGCCGGTCAAGCGGAGATGGTGCTCAGCGCCGCCTTTGATGTATTAAAGCCAGGCGGTGTATTCGG
CGTAGTGGAACACAGGGCCAAGCCGGGTATGAGTCTTAAGTCAGGCTACATGGAAGAAAACGAAGTGATCCGTTTAGCCA
AAGCGGCAGGCTTTGTGCTGGCAGATAAGAGTGAAGTTAACGCGAATCCCCGTGACACCAAAGACTATGCTGATGGTGTC
TGGACTTTGCCGCCATCACTCCGTAAAGGTGATACGGATAAGGCCCGTTACCTGGCCATCGGCGAGAGTGACCGTATGAC
CCTTAAGTTTGTGAAACCGGCCGAGCGTTGA

Upstream 100 bases:

>100_bases
TCGGGTTAATGCCCTGGTCAATTGCAACAAATTATGAATTCCCCTTGGAAAACCCCCTGAGCCTTGTTAGCTTCGGTGCC
AGTATTAGTAAGGTATTTCG

Downstream 100 bases:

>100_bases
GCTGGATTGACTCACGTGTTTAAAGGGGCCTATGAGCACCGTTAACACGACTTTAAGTCATTGCCCATGCCGGGAAATGC
CGATACCGGAACACCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: O-Methyltransferase; Methyltransferase Type; Methyltransferase-Like Protein; Exported Methyltransferase; Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFFGVKDNLTVVEFWPGGGWYTE
ILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNM
HNWAMAGQAEMVLSAAFDVLKPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV
WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER

Sequences:

>Translated_276_residues
MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFFGVKDNLTVVEFWPGGGWYTE
ILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNM
HNWAMAGQAEMVLSAAFDVLKPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV
WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER
>Mature_276_residues
MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFFGVKDNLTVVEFWPGGGWYTE
ILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNM
HNWAMAGQAEMVLSAAFDVLKPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV
WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER

Specific function: Unknown

COG id: COG4798

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30336; Mature: 30336

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHC
GVKDNLTVVEFWPGGGWYTEILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEG
CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHH
WLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNMHNWAMAGQAEMVLSAAFDVL
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHH
KPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV
CCCCEEEEEECCCCCCCCHHCCCCCCHHHHHHHHHCCEEEECCHHCCCCCCCCHHHHCCE
WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER
EECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure
MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHC
GVKDNLTVVEFWPGGGWYTEILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEG
CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHH
WLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNMHNWAMAGQAEMVLSAAFDVL
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHH
KPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV
CCCCEEEEEECCCCCCCCHHCCCCCCHHHHHHHHHCCEEEECCHHCCCCCCCCHHHHCCE
WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER
EECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA