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The map label for this gene is ycgL [C]

Identifier: 119775064

GI number: 119775064

Start: 2357226

End: 2357504

Strand: Reverse

Name: ycgL [C]

Synonym: Sama_1929

Alternate gene names: 119775064

Gene position: 2357504-2357226 (Counterclockwise)

Preceding gene: 119775068

Following gene: 119775063

Centisome position: 54.75

GC content: 45.16

Gene sequence:

>279_bases
ATGATATGTGCCGTTTATAAAAGCAGCCGTAAGCAAGAAACCTACTTATTCGTACCCAAAAGAGATGATTTCAGCCAGGT
GCCAGAGCCTTTATTACAGATGTTTGGTACACCTTTGCTGGTAATGCTGTTGCCGCTCGACAGGAAAGAGAAGCTTGGGA
TTGCCGATATCGACAAAGTGCGCAGCGAACTCGCTCAAAAAGGCTATTATTTGCAATTGCCACCCCCTAAAGATAATTTA
CTGACGCAACACCGCCGCGATTTAGGCATAGAGGATTGA

Upstream 100 bases:

>100_bases
TAATCAGTCTCGCGCTGATCTGCATTTTTTTCTAAAGAGCCCATGTTATAGTGTGCCCCAATCACTGGCAAGTTTGATAT
TTTCGGAAATTGACCCACCT

Downstream 100 bases:

>100_bases
TAAAGGATTCATCATACCCATCAGGAGGCGTTTGAAACTGTGAAGTCAATATTCTGTACTTCCCTATCAGCGTTGGCACT
GATGTCTGCCACTGTGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MICAVYKSSRKQETYLFVPKRDDFSQVPEPLLQMFGTPLLVMLLPLDRKEKLGIADIDKVRSELAQKGYYLQLPPPKDNL
LTQHRRDLGIED

Sequences:

>Translated_92_residues
MICAVYKSSRKQETYLFVPKRDDFSQVPEPLLQMFGTPLLVMLLPLDRKEKLGIADIDKVRSELAQKGYYLQLPPPKDNL
LTQHRRDLGIED
>Mature_92_residues
MICAVYKSSRKQETYLFVPKRDDFSQVPEPLLQMFGTPLLVMLLPLDRKEKLGIADIDKVRSELAQKGYYLQLPPPKDNL
LTQHRRDLGIED

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family

Homologues:

Organism=Escherichia coli, GI308199518, Length=89, Percent_Identity=55.0561797752809, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1929_SHEAM (A1S6X8)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927804.1
- ProteinModelPortal:   A1S6X8
- SMR:   A1S6X8
- STRING:   A1S6X8
- GeneID:   4604179
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1929
- NMPDR:   fig|326297.7.peg.1812
- eggNOG:   COG3100
- HOGENOM:   HBG754037
- OMA:   KRICSIY
- PhylomeDB:   A1S6X8
- HAMAP:   MF_01866
- InterPro:   IPR007840
- ProDom:   PD030374

Pfam domain/function: PF05166 YcgL

EC number: NA

Molecular weight: Translated: 10674; Mature: 10674

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICAVYKSSRKQETYLFVPKRDDFSQVPEPLLQMFGTPLLVMLLPLDRKEKLGIADIDKV
CEECCCCCCCCCCEEEEEECCCCHHHCCHHHHHHCCCCCEEHHCCCCCCCCCCCCCHHHH
RSELAQKGYYLQLPPPKDNLLTQHRRDLGIED
HHHHHHCCCEEECCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MICAVYKSSRKQETYLFVPKRDDFSQVPEPLLQMFGTPLLVMLLPLDRKEKLGIADIDKV
CEECCCCCCCCCCEEEEEECCCCHHHCCHHHHHHCCCCCEEHHCCCCCCCCCCCCCHHHH
RSELAQKGYYLQLPPPKDNLLTQHRRDLGIED
HHHHHHCCCEEECCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA