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The map label for this gene is dsbB

Identifier: 119775061

GI number: 119775061

Start: 2355121

End: 2355630

Strand: Direct

Name: dsbB

Synonym: Sama_1926

Alternate gene names: 119775061

Gene position: 2355121-2355630 (Clockwise)

Preceding gene: 119775060

Following gene: 119775065

Centisome position: 54.69

GC content: 52.55

Gene sequence:

>510_bases
ATGCAAAGCCTGATTTCGTTTGCCCACAGCCGTCTGTCCTGGGGCATTCTCGCCTTAAGCGCCCTCGCCCTGGAATCTGC
CGCACTCTATTTTCAGCACATTATGAAGCTCGACCCCTGCGTCATGTGTATTTATCAGCGAGTTGCCGTATTCGGTCTGC
TTGGTGCAGGTCTATTTGGGTTCATGGCGCCGGCTAATAGGGTTATTCGCGCGCTTGGTGCGCTTCTGTGGGGGATTTCC
GCTGCATGGGGACTTAAGCTTGCGCTTGAGCTGGTTGATATGCAAAACAACCCTAACCCATTTTCAACCTGCTCATTCCT
GCCGGAATTTCCGAGCTGGTTACAATTGCATGAATGGCTACCCAGTGTGTTTATGCCCACAGGTATGTGCACCGATATTC
CCTGGGAGTTTGCCGGGGTCACCATGGGTGAATGGATGATAGTGGCTTTCAGCGTGTACTTGCTTGCCTGGCTCGCGTTT
ATCGTGCCAATGCTGAAGAAGTCTGCCTGA

Upstream 100 bases:

>100_bases
TTCTCTGGATTGACTGAACTTAGCTGCTTAAGTAAAGTCAGAAATAGCCCGCACTCTTGTGTGCGGGCTTTTTTATGGAC
ATTCCACCCATGGAGACCCT

Downstream 100 bases:

>100_bases
AACACACCTTGTTGATTTTATTTGGGTGTGGTCAACAAGGCCCTTCAATAAAAAACGCCCTCTATGGGGCGTTTTTTAAT
CGACATCTTTAAGTGGCCAA

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQSLISFAHSRLSWGILALSALALESAALYFQHIMKLDPCVMCIYQRVAVFGLLGAGLFGFMAPANRVIRALGALLWGIS
AAWGLKLALELVDMQNNPNPFSTCSFLPEFPSWLQLHEWLPSVFMPTGMCTDIPWEFAGVTMGEWMIVAFSVYLLAWLAF
IVPMLKKSA

Sequences:

>Translated_169_residues
MQSLISFAHSRLSWGILALSALALESAALYFQHIMKLDPCVMCIYQRVAVFGLLGAGLFGFMAPANRVIRALGALLWGIS
AAWGLKLALELVDMQNNPNPFSTCSFLPEFPSWLQLHEWLPSVFMPTGMCTDIPWEFAGVTMGEWMIVAFSVYLLAWLAF
IVPMLKKSA
>Mature_169_residues
MQSLISFAHSRLSWGILALSALALESAALYFQHIMKLDPCVMCIYQRVAVFGLLGAGLFGFMAPANRVIRALGALLWGIS
AAWGLKLALELVDMQNNPNPFSTCSFLPEFPSWLQLHEWLPSVFMPTGMCTDIPWEFAGVTMGEWMIVAFSVYLLAWLAF
IVPMLKKSA

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family

Homologues:

Organism=Escherichia coli, GI1787433, Length=148, Percent_Identity=43.9189189189189, Blast_Score=136, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DSBB_SHEAM (A1S6X5)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927801.1
- ProteinModelPortal:   A1S6X5
- SMR:   A1S6X5
- STRING:   A1S6X5
- GeneID:   4604176
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1926
- eggNOG:   COG1495
- HOGENOM:   HBG637909
- OMA:   ALYFQHV
- PhylomeDB:   A1S6X5
- ProtClustDB:   PRK01749
- GO:   GO:0006810
- HAMAP:   MF_00286
- InterPro:   IPR003752
- InterPro:   IPR022920

Pfam domain/function: PF02600 DsbB

EC number: NA

Molecular weight: Translated: 18763; Mature: 18763

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x142d18e8)-; HASH(0x143b95cc)-; HASH(0x13dc4464)-; HASH(0x14074808)-;

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLISFAHSRLSWGILALSALALESAALYFQHIMKLDPCVMCIYQRVAVFGLLGAGLFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMAPANRVIRALGALLWGISAAWGLKLALELVDMQNNPNPFSTCSFLPEFPSWLQLHEWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHH
PSVFMPTGMCTDIPWEFAGVTMGEWMIVAFSVYLLAWLAFIVPMLKKSA
HHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MQSLISFAHSRLSWGILALSALALESAALYFQHIMKLDPCVMCIYQRVAVFGLLGAGLFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMAPANRVIRALGALLWGISAAWGLKLALELVDMQNNPNPFSTCSFLPEFPSWLQLHEWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHH
PSVFMPTGMCTDIPWEFAGVTMGEWMIVAFSVYLLAWLAFIVPMLKKSA
HHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA