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The map label for this gene is ycgB [H]

Identifier: 119775058

GI number: 119775058

Start: 2350836

End: 2352359

Strand: Direct

Name: ycgB [H]

Synonym: Sama_1923

Alternate gene names: 119775058

Gene position: 2350836-2352359 (Clockwise)

Preceding gene: 119775057

Following gene: 119775060

Centisome position: 54.59

GC content: 48.75

Gene sequence:

>1524_bases
ATGGGAAAACGCACACCTTTAAGCGACGGACCGGATTGGACCTTTGAACTGTTGGAAGAGTACCAACGGGAAATTGAGCG
GGTTGCAGCGCACTATCGGCTCAACACTTACCCAAATCAAATTGAGGTTATCACTGCCGAGCAGATGATGGATGCCTATG
CTGGCATCGGTATGCCCATAGGCTACACCCACTGGTCTTTTGGCAAACGTTTTATTCAAACAGAACAAAGCTACAAGCGA
GGCCAAATGGGGCTCGCCTATGAAATTGTTATCAATTCCAATCCCTGCATCGCCTATTTGATGGAAGAAAACACCATCAC
CATGCAGGCATTGGTGATGGCCCATGCTTGCTACGGCCACAACAGCTTTTTCAAAGGCAATTACCTGTTCAAAACCTGGA
CCGATGCCAGCTCAATTATCGACTATCTGGTCTTTGCCAAAAATTACATTGCAGAATGCGAACAGCGCCACGGTGTCGAT
GCCGTGGAAAATGTAATCGATTCCTGTCATGCCCTAATGAACTATGGTGTTGACCGCTACAAACGCCCGTCCGAAATATC
ATTCCGCGAAGAAAAAGCCCGCCAGAAAGAGCGTGAGGAATACCTGCAAAGTCAGGTGAATGACCTTTGGCGCACCATTC
CGGTCAGCCAGGTCGAAAAAGTCCAGCCCAAAAAACGTTTTCCTGCTGAGCCTCAGGAGAACATTCTCTATTTCATTGAG
AAGCACGCACCACTGCTTGAACCATGGCAAAGGGAAATCGTACGCATTGTCCGCAAGATGGGGCAGTATTTTTATCCCCA
GAAGCAAACCCAGGTGATGAACGAGGGCTGGGCCACCTTCTGGCACTACACCATTTTGAATCACCTCTATGATGAAGGTC
TGGTGACCGACCGTTTTATGCTGGAATTCCTGCAAAGCCACACGGGTGTGGTCGCACAACCCGCTTACAACAGTCGCTAT
TATTCCGGCATTAACCCCTACGCCCTCGGATTCAATATGTTCACCGATATCCGCCGGATCTGTGAAAACCCCACAGAGGA
AGACAGAGCCTGGTTCCCTGAAATTGCCGGCAGCAATTGGCTCGATACCCTGCACTTTGCCATGGAAAACTTTAAAGACG
AGAGTTTTATCAGCCAATATCTGTCGCCGGCCATGATAAGACAGTTCAAGCTTTTCGGGATTGTGGACGACGAGCGAAAA
AACTATCTGTCTATTTCAGCTATCCATGATGAGGTCGGCTATCGGGAAATTCGGCAAACCATGTCACAGCAATACAACCT
CTCCAATCTTGAACCCAACATTCAGGTGCACAGGGTTGAGGTAATGGGCGATCGCTCCATGACATTAAGGTATGTTCCTT
TCAACAATATTCCACTGGCAGACGATTACAGGGAAGTGCTGAAACACCTTCATCGATTGTGGGGTTTCACCGTGGTGCTT
GAACAGGAAGAAAGTGATGGCACCATCAAGGAGCTGGCACGCTGCCCCCCACGAGATGAAGAGGGACACTCGGTGAAAAT
ATAA

Upstream 100 bases:

>100_bases
AGTGTATGACAACATGGCCGTACAGCACATTCGCCAGGCAGAAGATATCTATCCTGTGTTCCGAGAGCTGTTCAAAAAGC
AGGCGGTATAAGGGGGCTTT

Downstream 100 bases:

>100_bases
AAAAACGCAGCCTGATGGCTGCGTTTTTTATGCCGCTGAAAGCATTAACCGTGTGGATCCTGATTAATATCAGCGGGCAT
GGCGTCTTTCAGCTTTTGCC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MGKRTPLSDGPDWTFELLEEYQREIERVAAHYRLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIQTEQSYKR
GQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKGNYLFKTWTDASSIIDYLVFAKNYIAECEQRHGVD
AVENVIDSCHALMNYGVDRYKRPSEISFREEKARQKEREEYLQSQVNDLWRTIPVSQVEKVQPKKRFPAEPQENILYFIE
KHAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQSHTGVVAQPAYNSRY
YSGINPYALGFNMFTDIRRICENPTEEDRAWFPEIAGSNWLDTLHFAMENFKDESFISQYLSPAMIRQFKLFGIVDDERK
NYLSISAIHDEVGYREIRQTMSQQYNLSNLEPNIQVHRVEVMGDRSMTLRYVPFNNIPLADDYREVLKHLHRLWGFTVVL
EQEESDGTIKELARCPPRDEEGHSVKI

Sequences:

>Translated_507_residues
MGKRTPLSDGPDWTFELLEEYQREIERVAAHYRLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIQTEQSYKR
GQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKGNYLFKTWTDASSIIDYLVFAKNYIAECEQRHGVD
AVENVIDSCHALMNYGVDRYKRPSEISFREEKARQKEREEYLQSQVNDLWRTIPVSQVEKVQPKKRFPAEPQENILYFIE
KHAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQSHTGVVAQPAYNSRY
YSGINPYALGFNMFTDIRRICENPTEEDRAWFPEIAGSNWLDTLHFAMENFKDESFISQYLSPAMIRQFKLFGIVDDERK
NYLSISAIHDEVGYREIRQTMSQQYNLSNLEPNIQVHRVEVMGDRSMTLRYVPFNNIPLADDYREVLKHLHRLWGFTVVL
EQEESDGTIKELARCPPRDEEGHSVKI
>Mature_506_residues
GKRTPLSDGPDWTFELLEEYQREIERVAAHYRLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIQTEQSYKRG
QMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKGNYLFKTWTDASSIIDYLVFAKNYIAECEQRHGVDA
VENVIDSCHALMNYGVDRYKRPSEISFREEKARQKEREEYLQSQVNDLWRTIPVSQVEKVQPKKRFPAEPQENILYFIEK
HAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQSHTGVVAQPAYNSRYY
SGINPYALGFNMFTDIRRICENPTEEDRAWFPEIAGSNWLDTLHFAMENFKDESFISQYLSPAMIRQFKLFGIVDDERKN
YLSISAIHDEVGYREIRQTMSQQYNLSNLEPNIQVHRVEVMGDRSMTLRYVPFNNIPLADDYREVLKHLHRLWGFTVVLE
QEESDGTIKELARCPPRDEEGHSVKI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=495, Percent_Identity=74.3434343434343, Blast_Score=797, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59705; Mature: 59574

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRTPLSDGPDWTFELLEEYQREIERVAAHYRLNTYPNQIEVITAEQMMDAYAGIGMPI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCC
GYTHWSFGKRFIQTEQSYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGH
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCC
NSFFKGNYLFKTWTDASSIIDYLVFAKNYIAECEQRHGVDAVENVIDSCHALMNYGVDRY
CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHC
KRPSEISFREEKARQKEREEYLQSQVNDLWRTIPVSQVEKVQPKKRFPAEPQENILYFIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCCCCCHHHEEEEC
KHAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFM
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
LEFLQSHTGVVAQPAYNSRYYSGINPYALGFNMFTDIRRICENPTEEDRAWFPEIAGSNW
HHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHCCCCH
LDTLHFAMENFKDESFISQYLSPAMIRQFKLFGIVDDERKNYLSISAIHDEVGYREIRQT
HHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHHHHHHH
MSQQYNLSNLEPNIQVHRVEVMGDRSMTLRYVPFNNIPLADDYREVLKHLHRLWGFTVVL
HHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCEEEEE
EQEESDGTIKELARCPPRDEEGHSVKI
ECCCCCCHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure 
GKRTPLSDGPDWTFELLEEYQREIERVAAHYRLNTYPNQIEVITAEQMMDAYAGIGMPI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCC
GYTHWSFGKRFIQTEQSYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGH
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCC
NSFFKGNYLFKTWTDASSIIDYLVFAKNYIAECEQRHGVDAVENVIDSCHALMNYGVDRY
CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHC
KRPSEISFREEKARQKEREEYLQSQVNDLWRTIPVSQVEKVQPKKRFPAEPQENILYFIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCCCCCHHHEEEEC
KHAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFM
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
LEFLQSHTGVVAQPAYNSRYYSGINPYALGFNMFTDIRRICENPTEEDRAWFPEIAGSNW
HHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHCCCCH
LDTLHFAMENFKDESFISQYLSPAMIRQFKLFGIVDDERKNYLSISAIHDEVGYREIRQT
HHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHHHHHHH
MSQQYNLSNLEPNIQVHRVEVMGDRSMTLRYVPFNNIPLADDYREVLKHLHRLWGFTVVL
HHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCEEEEE
EQEESDGTIKELARCPPRDEEGHSVKI
ECCCCCCHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]