| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yeaG [H]
Identifier: 119775056
GI number: 119775056
Start: 2347569
End: 2349503
Strand: Direct
Name: yeaG [H]
Synonym: Sama_1921
Alternate gene names: 119775056
Gene position: 2347569-2349503 (Clockwise)
Preceding gene: 119775055
Following gene: 119775057
Centisome position: 54.52
GC content: 49.35
Gene sequence:
>1935_bases ATGGGCATCTTTGAACATTACCAACAGCGCTATGAAAAGAAACTCGAAGAAGAATATTCACTGCAAGAGTTTCTTGAAAT CTGCAAGCAGGATAAAAGCGCATACGCCACCGCGGCCGAACGTTTACTCTTGGCTATCGGTGAGCCCGAACTTATCGACA CTTCCAAAAATTCAGTTCTGAGCCGCATCTTCTCAAATCGGCTTATTTCCCGCTATCCGGCCTTCAAAGACTTCTTCGGC ATGGAAGACGCCATAGAGCAGATAGTGGCTTACCTTAAACATTCGGCTCAAGGGCTTGAAGAGTCGAAGCAAATTCTCTA TTTGCTGGGTCCTGTGGGCGGCGGTAAGTCCTCTCTGGCCGAAAAACTCAAGGCGTTGATGCAGAAAGTCCCTGTGTATG TGCTCAGTGCCGACGGGGTACGCAGCCCGGTTAACGATCATCCATTTTGCCTGTTCGATGCAGACGAAGATGGCAAACTG CTTCAGGAAGAGTACGACATTCCAACCCGTTACCTGCGTACCATCATGTCGCCTTGGGCTGTTAAACGCCTGCACGATTA TGGCGGCGATATCAGTCGCTTTAAGGTGGTCAAAGTCTTCCCCTCGGTGCTCGATCAAATCGCCGTGGCAAAAACCGAAC CCGGAGATGAAAACAACCAGGATATTTCGTCGTTGGTAGGTAAAGTGGATATCCGCCAGTTGGAACACTTTGCCCAAAAC GATGCCGATGCCTACTCCTATTCAGGTGCGCTGTGCCGCGCGAACCAGGGCCTGATGGAATTTGTGGAGATGTTTAAGGC GCCCATCAAGGTACTGCACCCGCTGCTGACTGCCACTCAGGAAGGAAACTACAACGGCACCGAGGGCCTGTCGGCTCTGC CCTTCAGCGGCATTATCCTTGCCCACTCCAACGAATCTGAATGGTCGAGTTTTAAAAATAATAAAAATAACGAGGCCTTC CTCGACCGTGTTTATATCGTTAAGGTGCCCTACTGCCTGCGGGTATCGGAAGAAATCCAAATCTACAAAAAACTTATCAT CAATTCAGAGTTGTCCGAAGCGCCATGTGCCCCGGGCACTCTGGAAACACTGGCTCAATTCAGCGTACTTTCACGGCTGA AAGTCCCTGAAAACTCGTCTATTTATTCCAAGATGCGGGTCTATGATGGTGAGAGTCTCAAGGATACCGATCCCAAGGCC AAGTCCTATCAGGAGTACCGAGACTACGCCGGTGTTGACGAAGGCATGAACGGACTCTCGACCCGCTTTGCCTTTAAAAT CCTCTCCAAGGTATTTAACTTTGACCATACCGAAATCGCGGCTAACCCTGTGCACCTATTCTATGTACTGGAGCGTCAGA TTGAAGCCGAGCAGTTTCCCGGCGAAACCGCCGAGCGCTACCTTGAGTTCCTGAAAGGATATCTCATCCCCAAATACGTC GAATTTATTGGGAAAGAGATCCAGACAGCTTATCTGGAGTCTTACTCCGAGTACGGACAGAACATATTCGATCGTTATGT CACCTATGCTGACTTCTGGATCCAGGATCAGGAATACCGTGACCCTGAAACAGGTCAACTGTTTGACCGCGCTGCACTCA ATGCTGAACTTGAGAAAATCGAGAAACCCGCCGGGATCTCTAATCCCAAAGACTTCCGTAACGAAATCGTTAACTTCGTA CTGCGGGCACGGGCCAACAATGAGGGTAAAAACCCCACCTGGACCAGCTATGAAAAACTCAGAACTGTCATCGAGAAGAA GATGTTCTCCAACACCGAAGATCTGCTGCCGGTGATTTCCTTCAATGCCAAAACCTCCACAGACGATCAGCGCAAACACG ATGACTTTGTCAATCGCATGATGGAGAAAGGCTACACCAAAAAACAAGTGCGTCTGTTGTCTGAATGGTATCTGCGGGTT CGTAAATCGTCTTGA
Upstream 100 bases:
>100_bases TTTTGACACAGCGCAAGATTTTGTGTCTAAGATTACAGGTAGGGAGCAAAATCAGATCGCCGCTCCTTGCATCACATCAA TGGCGTTTCAGGGGGTTATC
Downstream 100 bases:
>100_bases TACCAATACCCGCCTGCTCGCAGGCGGGTTGCTGGATTTGGGGAGGTGCGTATGGCGAACTTTATCGACAGGCGACTGAA TGCCAAGGGTAAGAGTACCG
Product: putative serine protein kinase, PrkA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MGIFEHYQQRYEKKLEEEYSLQEFLEICKQDKSAYATAAERLLLAIGEPELIDTSKNSVLSRIFSNRLISRYPAFKDFFG MEDAIEQIVAYLKHSAQGLEESKQILYLLGPVGGGKSSLAEKLKALMQKVPVYVLSADGVRSPVNDHPFCLFDADEDGKL LQEEYDIPTRYLRTIMSPWAVKRLHDYGGDISRFKVVKVFPSVLDQIAVAKTEPGDENNQDISSLVGKVDIRQLEHFAQN DADAYSYSGALCRANQGLMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGLSALPFSGIILAHSNESEWSSFKNNKNNEAF LDRVYIVKVPYCLRVSEEIQIYKKLIINSELSEAPCAPGTLETLAQFSVLSRLKVPENSSIYSKMRVYDGESLKDTDPKA KSYQEYRDYAGVDEGMNGLSTRFAFKILSKVFNFDHTEIAANPVHLFYVLERQIEAEQFPGETAERYLEFLKGYLIPKYV EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRAALNAELEKIEKPAGISNPKDFRNEIVNFV LRARANNEGKNPTWTSYEKLRTVIEKKMFSNTEDLLPVISFNAKTSTDDQRKHDDFVNRMMEKGYTKKQVRLLSEWYLRV RKSS
Sequences:
>Translated_644_residues MGIFEHYQQRYEKKLEEEYSLQEFLEICKQDKSAYATAAERLLLAIGEPELIDTSKNSVLSRIFSNRLISRYPAFKDFFG MEDAIEQIVAYLKHSAQGLEESKQILYLLGPVGGGKSSLAEKLKALMQKVPVYVLSADGVRSPVNDHPFCLFDADEDGKL LQEEYDIPTRYLRTIMSPWAVKRLHDYGGDISRFKVVKVFPSVLDQIAVAKTEPGDENNQDISSLVGKVDIRQLEHFAQN DADAYSYSGALCRANQGLMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGLSALPFSGIILAHSNESEWSSFKNNKNNEAF LDRVYIVKVPYCLRVSEEIQIYKKLIINSELSEAPCAPGTLETLAQFSVLSRLKVPENSSIYSKMRVYDGESLKDTDPKA KSYQEYRDYAGVDEGMNGLSTRFAFKILSKVFNFDHTEIAANPVHLFYVLERQIEAEQFPGETAERYLEFLKGYLIPKYV EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRAALNAELEKIEKPAGISNPKDFRNEIVNFV LRARANNEGKNPTWTSYEKLRTVIEKKMFSNTEDLLPVISFNAKTSTDDQRKHDDFVNRMMEKGYTKKQVRLLSEWYLRV RKSS >Mature_643_residues GIFEHYQQRYEKKLEEEYSLQEFLEICKQDKSAYATAAERLLLAIGEPELIDTSKNSVLSRIFSNRLISRYPAFKDFFGM EDAIEQIVAYLKHSAQGLEESKQILYLLGPVGGGKSSLAEKLKALMQKVPVYVLSADGVRSPVNDHPFCLFDADEDGKLL QEEYDIPTRYLRTIMSPWAVKRLHDYGGDISRFKVVKVFPSVLDQIAVAKTEPGDENNQDISSLVGKVDIRQLEHFAQND ADAYSYSGALCRANQGLMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGLSALPFSGIILAHSNESEWSSFKNNKNNEAFL DRVYIVKVPYCLRVSEEIQIYKKLIINSELSEAPCAPGTLETLAQFSVLSRLKVPENSSIYSKMRVYDGESLKDTDPKAK SYQEYRDYAGVDEGMNGLSTRFAFKILSKVFNFDHTEIAANPVHLFYVLERQIEAEQFPGETAERYLEFLKGYLIPKYVE FIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRAALNAELEKIEKPAGISNPKDFRNEIVNFVL RARANNEGKNPTWTSYEKLRTVIEKKMFSNTEDLLPVISFNAKTSTDDQRKHDDFVNRMMEKGYTKKQVRLLSEWYLRVR KSS
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
Organism=Escherichia coli, GI1788083, Length=644, Percent_Identity=84.1614906832298, Blast_Score=1165, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 73840; Mature: 73709
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFEHYQQRYEKKLEEEYSLQEFLEICKQDKSAYATAAERLLLAIGEPELIDTSKNSVL CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SRIFSNRLISRYPAFKDFFGMEDAIEQIVAYLKHSAQGLEESKQILYLLGPVGGGKSSLA HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCCHHHHH EKLKALMQKVPVYVLSADGVRSPVNDHPFCLFDADEDGKLLQEEYDIPTRYLRTIMSPWA HHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHH VKRLHDYGGDISRFKVVKVFPSVLDQIAVAKTEPGDENNQDISSLVGKVDIRQLEHFAQN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC DADAYSYSGALCRANQGLMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGLSALPFSGIIL CCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE AHSNESEWSSFKNNKNNEAFLDRVYIVKVPYCLRVSEEIQIYKKLIINSELSEAPCAPGT EECCCHHHHHHCCCCCCHHHHHEEHEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LETLAQFSVLSRLKVPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHCCHHHH TRFAFKILSKVFNFDHTEIAANPVHLFYVLERQIEAEQFPGETAERYLEFLKGYLIPKYV HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRAALNAELEKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH EKPAGISNPKDFRNEIVNFVLRARANNEGKNPTWTSYEKLRTVIEKKMFSNTEDLLPVIS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHC FNAKTSTDDQRKHDDFVNRMMEKGYTKKQVRLLSEWYLRVRKSS CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIFEHYQQRYEKKLEEEYSLQEFLEICKQDKSAYATAAERLLLAIGEPELIDTSKNSVL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SRIFSNRLISRYPAFKDFFGMEDAIEQIVAYLKHSAQGLEESKQILYLLGPVGGGKSSLA HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCCHHHHH EKLKALMQKVPVYVLSADGVRSPVNDHPFCLFDADEDGKLLQEEYDIPTRYLRTIMSPWA HHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHH VKRLHDYGGDISRFKVVKVFPSVLDQIAVAKTEPGDENNQDISSLVGKVDIRQLEHFAQN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC DADAYSYSGALCRANQGLMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGLSALPFSGIIL CCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE AHSNESEWSSFKNNKNNEAFLDRVYIVKVPYCLRVSEEIQIYKKLIINSELSEAPCAPGT EECCCHHHHHHCCCCCCHHHHHEEHEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LETLAQFSVLSRLKVPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHCCHHHH TRFAFKILSKVFNFDHTEIAANPVHLFYVLERQIEAEQFPGETAERYLEFLKGYLIPKYV HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRAALNAELEKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH EKPAGISNPKDFRNEIVNFVLRARANNEGKNPTWTSYEKLRTVIEKKMFSNTEDLLPVIS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHC FNAKTSTDDQRKHDDFVNRMMEKGYTKKQVRLLSEWYLRVRKSS CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]