Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775052

Identifier: 119775052

GI number: 119775052

Start: 2343453

End: 2344607

Strand: Reverse

Name: 119775052

Synonym: Sama_1917

Alternate gene names: NA

Gene position: 2344607-2343453 (Counterclockwise)

Preceding gene: 119775054

Following gene: 119775051

Centisome position: 54.45

GC content: 53.42

Gene sequence:

>1155_bases
ATGATGAAATCCTTTCTCAAAGTTGCATTAGGTCTTGGGCTGCTGTTTGGCCATGTTGGCGCCGAGGCAGTTCAGGTCAG
CCGTTTGAACGAGGCCGATGTGGCTGTCAGTTCAAGAAGCAGTGCTGAGCTTGAACAAGCCATTAAAGATGCCTTGGCCA
AGGTGTTGGTAAAAAACAGTGGCAGCACGGAAACACTTGTTAATGCCGAAGTGCAGTCGCTGATTGCTCAGGCACGATCT
GTGCTGAGCCAATATGGCTATGTCGAAAATGATGGGCGCTTATACGTTCGGGCGAGTTTCGATAACACCCGGGTCACCTC
AACCCTTCGCAGCGCGCAGTTGCCTGTATGGGGCAAACAGCGTCCCCTGACCTTGCTGTGGCTGGCCACCGATGGTGAAG
GGGAGAAGGTGTTGCTGGGCGACCAATCGGATTTGGCTATTCGCAGTCAGTTCAATGATGCCAGCGCTCAGGCTGGGGTG
CCTTTACTGTTTCCCTTGCTGGACTTGGACGACATGATGGCGGCTAACATCAATTCTGTCAGAGGTTTTTTTGCAGATGA
AGTAGCCCAGGCATCCCGCCGATATCAGTCGGACTTTTTTGCACTGGCGACCCTTGAAGCAGCCGGTTCGGGTTACGAAT
ATCGTCTGGCTCTCTACCCAAGGCAGGCTCAGAGCGATATCGCAACACCGCTGCAATCTGTAACTCAGGTGGAAGGCAGT
GCTGACAATCTTGACAGTGCCATCAGTGCCATCCTATCCGGTATGAGCTCCTTTTACGTGTCACGTTATGCTGTGACCGG
AACCAGTCAGGAAAGTGAAACCGAGTTGGTGTTTACCGGTGTGGACCGCCTTAAAGCTGTGGTGGATATAGAGACTTATC
TGGGGCAGCTTTCTATGGTCAAATCTGCCCGTTTGGTGAGTATCGAAGGCGATTCTCTGCGCTTTGCGCTGACACTCTTT
GGCAGTGAGGATGAGCTCAGGCGAACCCTGGCGCTGGAACCACGTCTTCAGCCCCAAGGCGGAACTGAAAATAACAGCCA
ACAGGGTGAAGGTACCATTGTCGACCCATTCGCCACCGCTGTGCAGCCCGGTGAGATCCTGGAAGTGCCCGGTGTGCCTG
TGCAGCCAAATCGTTACCAATGGCGTGGTCAATGA

Upstream 100 bases:

>100_bases
TGGCCAATAACTGACCCGGCCGCGTCTTTTTGTCGCTGTGTTGCCGCGCTGTAAGTATGTTACACTGCCGCTCTATCATT
GTTGGGAACGACCATTTTTC

Downstream 100 bases:

>100_bases
GCCTTGCGGCTCGGAATTTAACGGCGTCCGTGATACACTGACGCCGTTTTTATTCAGGTGCCACAAGATAGATTGAGAAG
TAACCGAGTGACACAACATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MMKSFLKVALGLGLLFGHVGAEAVQVSRLNEADVAVSSRSSAELEQAIKDALAKVLVKNSGSTETLVNAEVQSLIAQARS
VLSQYGYVENDGRLYVRASFDNTRVTSTLRSAQLPVWGKQRPLTLLWLATDGEGEKVLLGDQSDLAIRSQFNDASAQAGV
PLLFPLLDLDDMMAANINSVRGFFADEVAQASRRYQSDFFALATLEAAGSGYEYRLALYPRQAQSDIATPLQSVTQVEGS
ADNLDSAISAILSGMSSFYVSRYAVTGTSQESETELVFTGVDRLKAVVDIETYLGQLSMVKSARLVSIEGDSLRFALTLF
GSEDELRRTLALEPRLQPQGGTENNSQQGEGTIVDPFATAVQPGEILEVPGVPVQPNRYQWRGQ

Sequences:

>Translated_384_residues
MMKSFLKVALGLGLLFGHVGAEAVQVSRLNEADVAVSSRSSAELEQAIKDALAKVLVKNSGSTETLVNAEVQSLIAQARS
VLSQYGYVENDGRLYVRASFDNTRVTSTLRSAQLPVWGKQRPLTLLWLATDGEGEKVLLGDQSDLAIRSQFNDASAQAGV
PLLFPLLDLDDMMAANINSVRGFFADEVAQASRRYQSDFFALATLEAAGSGYEYRLALYPRQAQSDIATPLQSVTQVEGS
ADNLDSAISAILSGMSSFYVSRYAVTGTSQESETELVFTGVDRLKAVVDIETYLGQLSMVKSARLVSIEGDSLRFALTLF
GSEDELRRTLALEPRLQPQGGTENNSQQGEGTIVDPFATAVQPGEILEVPGVPVQPNRYQWRGQ
>Mature_384_residues
MMKSFLKVALGLGLLFGHVGAEAVQVSRLNEADVAVSSRSSAELEQAIKDALAKVLVKNSGSTETLVNAEVQSLIAQARS
VLSQYGYVENDGRLYVRASFDNTRVTSTLRSAQLPVWGKQRPLTLLWLATDGEGEKVLLGDQSDLAIRSQFNDASAQAGV
PLLFPLLDLDDMMAANINSVRGFFADEVAQASRRYQSDFFALATLEAAGSGYEYRLALYPRQAQSDIATPLQSVTQVEGS
ADNLDSAISAILSGMSSFYVSRYAVTGTSQESETELVFTGVDRLKAVVDIETYLGQLSMVKSARLVSIEGDSLRFALTLF
GSEDELRRTLALEPRLQPQGGTENNSQQGEGTIVDPFATAVQPGEILEVPGVPVQPNRYQWRGQ

Specific function: Unknown

COG id: COG3249

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41544; Mature: 41544

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSFLKVALGLGLLFGHVGAEAVQVSRLNEADVAVSSRSSAELEQAIKDALAKVLVKNS
CHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCC
GSTETLVNAEVQSLIAQARSVLSQYGYVENDGRLYVRASFDNTRVTSTLRSAQLPVWGKQ
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEECCCCHHHHHHHHCCCCCCCCC
RPLTLLWLATDGEGEKVLLGDQSDLAIRSQFNDASAQAGVPLLFPLLDLDDMMAANINSV
CCEEEEEEEECCCCCEEEECCCCCEEEECCCCCCHHHCCCCCEEHHHCHHHHHHHCHHHH
RGFFADEVAQASRRYQSDFFALATLEAAGSGYEYRLALYPRQAQSDIATPLQSVTQVEGS
HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC
ADNLDSAISAILSGMSSFYVSRYAVTGTSQESETELVFTGVDRLKAVVDIETYLGQLSMV
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
KSARLVSIEGDSLRFALTLFGSEDELRRTLALEPRLQPQGGTENNSQQGEGTIVDPFATA
CCCEEEEECCCCEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECHHHHH
VQPGEILEVPGVPVQPNRYQWRGQ
CCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKSFLKVALGLGLLFGHVGAEAVQVSRLNEADVAVSSRSSAELEQAIKDALAKVLVKNS
CHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHHHCCC
GSTETLVNAEVQSLIAQARSVLSQYGYVENDGRLYVRASFDNTRVTSTLRSAQLPVWGKQ
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEEECCCCHHHHHHHHCCCCCCCCC
RPLTLLWLATDGEGEKVLLGDQSDLAIRSQFNDASAQAGVPLLFPLLDLDDMMAANINSV
CCEEEEEEEECCCCCEEEECCCCCEEEECCCCCCHHHCCCCCEEHHHCHHHHHHHCHHHH
RGFFADEVAQASRRYQSDFFALATLEAAGSGYEYRLALYPRQAQSDIATPLQSVTQVEGS
HHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCC
ADNLDSAISAILSGMSSFYVSRYAVTGTSQESETELVFTGVDRLKAVVDIETYLGQLSMV
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
KSARLVSIEGDSLRFALTLFGSEDELRRTLALEPRLQPQGGTENNSQQGEGTIVDPFATA
CCCEEEEECCCCEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECHHHHH
VQPGEILEVPGVPVQPNRYQWRGQ
CCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA