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The map label for this gene is perM [H]

Identifier: 119775046

GI number: 119775046

Start: 2338667

End: 2339785

Strand: Reverse

Name: perM [H]

Synonym: Sama_1911

Alternate gene names: 119775046

Gene position: 2339785-2338667 (Counterclockwise)

Preceding gene: 119775047

Following gene: 119775043

Centisome position: 54.34

GC content: 53.53

Gene sequence:

>1119_bases
ATGCTCGAATTCGTGACTCGCTGGTACAAGGACAAGTTCAGTGACCCCCAGGCAGTGACCCTGCTGTTTATCCTTTTTGG
CCTCTGGGCGCTGATTTATTTTGCCGGTGGTCTGCTCGCCCCCTTGTTGGTGGCGCTGGTGCTGGCCTTTTTGCTCGAGT
GGCCGGTGGCACAAATGTCCCGCATCGGTGTAAACCGCACCACAGGGGCATCGCTGATGTTGGTGCTGTTTGCCGGCATA
GTGCTGTTAATGGTGTTTGGTTTGGTGCCAAGCCTCTGGAAGCAGGGCATGTCACTTTTGACCGAGCTGCCTGCCATGCT
CGATAAAGGCATGGGTTACCTTGAGGAGCTCACCCAGAAGTACCCTCAATACGTCAGTGCCGAACAGGTGATAGCCATGG
AAACCGAGCTTAAGCGCATGCTGGACACTCAGCATCTACTGGATATCGGTAAGCAGATCCTGGGCTTCTCGGCGTCGCTG
TTGGTGCTGATGGTGTACACCATTTTGGTGCCGCTGCTGGTGTTCTTCTTCCTGAAAGACAAGGAAGAACTTATCCGTGG
CAGCAAACGCTTTTTCCCCAGTAACCGCGAGCTTGCCCGCAAGGTGTGGGGGGAGATGAACCAACAGATTTTCAACTATA
TTCGCGGCAAGGTGATTGAAATCATTATTGTTGGCGCCGTGAGCTACGTGTTTTTTGCCTTTATGGGCTTGCGGTATTCG
GCGCTTTTGGGGGTTCTGACCGGTTTGTCGGTGCTTATTCCCTATGTGGGCGCGACCCTGGTGACCCTGCCCATTGCTCT
GGTTGGTTTTTTTCAGTGGGGTTTCTCTCCGGAATTTGGTTACCTGATGTTGGGCTACGGCATTATTCAGGCGCTGGATG
GGAACGTGCTGGTACCTGTGTTGTTCTCTGACGCAGTGGATTTACACCCGGTTATCATCATTGCGGCGGTATTGGTGTTT
GGCGGCCTGTGGGGCTTTTGGGGGGTGTTTTTCGCCATCCCGTTGGCATCTCTCGTAAAAGCGGTGGTCAATGTGTGGCC
GCGGAATCATACGTCCGATAAATCAGATGGCGACGGCCCTGCGGGTAACGGCATAACGGATAAAACCGTCAGTGAATAA

Upstream 100 bases:

>100_bases
TTGCCTTAAACTTCTTATCAGCCACGTGTCCCATACGCTGTAGCCGTATTCAGTAACCCATATTCAGTAACCATAGCGAT
CTTATCTGTAAGGAGCCCCA

Downstream 100 bases:

>100_bases
GCTTGCAGTGTAGACGTGTCACTCTGTGTAACATTAAAAAAGGCCCATCAGGGCCTTTTTTAATGTCATATTTTACCGCG
AGTTTTATCGCCAGTTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MLEFVTRWYKDKFSDPQAVTLLFILFGLWALIYFAGGLLAPLLVALVLAFLLEWPVAQMSRIGVNRTTGASLMLVLFAGI
VLLMVFGLVPSLWKQGMSLLTELPAMLDKGMGYLEELTQKYPQYVSAEQVIAMETELKRMLDTQHLLDIGKQILGFSASL
LVLMVYTILVPLLVFFFLKDKEELIRGSKRFFPSNRELARKVWGEMNQQIFNYIRGKVIEIIIVGAVSYVFFAFMGLRYS
ALLGVLTGLSVLIPYVGATLVTLPIALVGFFQWGFSPEFGYLMLGYGIIQALDGNVLVPVLFSDAVDLHPVIIIAAVLVF
GGLWGFWGVFFAIPLASLVKAVVNVWPRNHTSDKSDGDGPAGNGITDKTVSE

Sequences:

>Translated_372_residues
MLEFVTRWYKDKFSDPQAVTLLFILFGLWALIYFAGGLLAPLLVALVLAFLLEWPVAQMSRIGVNRTTGASLMLVLFAGI
VLLMVFGLVPSLWKQGMSLLTELPAMLDKGMGYLEELTQKYPQYVSAEQVIAMETELKRMLDTQHLLDIGKQILGFSASL
LVLMVYTILVPLLVFFFLKDKEELIRGSKRFFPSNRELARKVWGEMNQQIFNYIRGKVIEIIIVGAVSYVFFAFMGLRYS
ALLGVLTGLSVLIPYVGATLVTLPIALVGFFQWGFSPEFGYLMLGYGIIQALDGNVLVPVLFSDAVDLHPVIIIAAVLVF
GGLWGFWGVFFAIPLASLVKAVVNVWPRNHTSDKSDGDGPAGNGITDKTVSE
>Mature_372_residues
MLEFVTRWYKDKFSDPQAVTLLFILFGLWALIYFAGGLLAPLLVALVLAFLLEWPVAQMSRIGVNRTTGASLMLVLFAGI
VLLMVFGLVPSLWKQGMSLLTELPAMLDKGMGYLEELTQKYPQYVSAEQVIAMETELKRMLDTQHLLDIGKQILGFSASL
LVLMVYTILVPLLVFFFLKDKEELIRGSKRFFPSNRELARKVWGEMNQQIFNYIRGKVIEIIIVGAVSYVFFAFMGLRYS
ALLGVLTGLSVLIPYVGATLVTLPIALVGFFQWGFSPEFGYLMLGYGIIQALDGNVLVPVLFSDAVDLHPVIIIAAVLVF
GGLWGFWGVFFAIPLASLVKAVVNVWPRNHTSDKSDGDGPAGNGITDKTVSE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=358, Percent_Identity=50, Blast_Score=352, Evalue=2e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41223; Mature: 41223

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]