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The map label for this gene is bepF [H]

Identifier: 119775041

GI number: 119775041

Start: 2333917

End: 2335002

Strand: Reverse

Name: bepF [H]

Synonym: Sama_1906

Alternate gene names: 119775041

Gene position: 2335002-2333917 (Counterclockwise)

Preceding gene: 119775042

Following gene: 119775040

Centisome position: 54.22

GC content: 57.27

Gene sequence:

>1086_bases
ATGAAAAAGATAGCGTTTCTTTTAGCCCTTGTAGGGGGTGCGGGTGCCTGGTATCTGTATTCTCTGGATGAGTCCACCGG
TGGTCCCGCTCGTCCTCGCCCTGTGCCCAATGTCGTCGTGACCAAGGTAGCTACCCAGGAAGTACGGGATGAGGTTGAAG
CCCTCGGCACAACCCACGCCAACGAGTCTGTTACCATTACTGCCAAGGTTACCGACGTTGCCACCAAGGTGAATTTCAGC
GACGGCGATATCGTCCGCGCAGGACAATTGTTGGTTCAGCTTCAGGATGCCGAGCAGCGCGCCCGGGTTCAGGTTGCCAA
GGTTAAGGTTATCGACAATCAGCGCGAATTTGACCGTATCCGTTCGCTGGTGACCAGTCAAACCGTGGCCGAGCTTGAAC
GTGACCGGCTGCAAACCCTGATTGATACCAGCCGTGCCGAGCTGGAGCAGGCGGAATCTGCACTGCGTGATCGTGCCATC
ACAGCCCCCTTCGCCGGCCGCCTTGGTCTGCGTCAGGTCAGTCCCGGCGCGCTGGTGACGCCCGGCACAGCGGTCACAAC
CCTCGATGACATTTCCACCATCAAGCTGGACTTTGCGGTTCCCGAACGCTTTTTACCTCAGCTGCATCCCGGTAAAGCGG
TGGAAGCCCAGGCTGTTGCCTACGAAGGCCAGCTCTTTACCGGCAAGGTAACCTCCATCGACAGTCGGGTTAATCCTTCT
ACCCGTGCCGTAACCGTACGCGCCGAAATTCCCAACCCCGATGCCAAACTGCTGCCGGGGATGCTGATGAAAATTCGCCT
CATCAAAACCAGTCGCGAAGCCATTATGGTGCCTGAATCGGCCATTATACCGCTGCAAAACCGCCACTATGTATATATGG
TGGGCGCCGACAACAAGGTGGATCGTCGTGAAGTGACCATCGGCCTTCGTAAGCGCGGCTGGGCCGAAATTGTTGATGGT
TTGGCGCTTGGCGAAACCATCATGATCCGCGGGATCCTCAAGGTTCGCCCCGGCGACCAGGTGACCCCTGAACTTAAAGA
ACACTTCAGCGCATCCGTTGCCTCCGATGAGGAGAACGCTGCATGA

Upstream 100 bases:

>100_bases
AAGCCCGGTTGCTCGCAGGTAAACTAGCCTCTAACCGGAAAGCCGGCGTCCGCCTATTGGTGGGCGATAACGATAACACA
GCCTGAACTTCGGAAGTCAC

Downstream 100 bases:

>100_bases
TCCTGACAGATCTCTCTGTTAAACGTCCGGTATTCGCCTCGGTAATCAGCTTGCTGCTGATTGCTTTTGGCTTGGTGGCC
TTTGACAAGCTGCCACTGCG

Product: HlyD family-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKKIAFLLALVGGAGAWYLYSLDESTGGPARPRPVPNVVVTKVATQEVRDEVEALGTTHANESVTITAKVTDVATKVNFS
DGDIVRAGQLLVQLQDAEQRARVQVAKVKVIDNQREFDRIRSLVTSQTVAELERDRLQTLIDTSRAELEQAESALRDRAI
TAPFAGRLGLRQVSPGALVTPGTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFTGKVTSIDSRVNPS
TRAVTVRAEIPNPDAKLLPGMLMKIRLIKTSREAIMVPESAIIPLQNRHYVYMVGADNKVDRREVTIGLRKRGWAEIVDG
LALGETIMIRGILKVRPGDQVTPELKEHFSASVASDEENAA

Sequences:

>Translated_361_residues
MKKIAFLLALVGGAGAWYLYSLDESTGGPARPRPVPNVVVTKVATQEVRDEVEALGTTHANESVTITAKVTDVATKVNFS
DGDIVRAGQLLVQLQDAEQRARVQVAKVKVIDNQREFDRIRSLVTSQTVAELERDRLQTLIDTSRAELEQAESALRDRAI
TAPFAGRLGLRQVSPGALVTPGTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFTGKVTSIDSRVNPS
TRAVTVRAEIPNPDAKLLPGMLMKIRLIKTSREAIMVPESAIIPLQNRHYVYMVGADNKVDRREVTIGLRKRGWAEIVDG
LALGETIMIRGILKVRPGDQVTPELKEHFSASVASDEENAA
>Mature_361_residues
MKKIAFLLALVGGAGAWYLYSLDESTGGPARPRPVPNVVVTKVATQEVRDEVEALGTTHANESVTITAKVTDVATKVNFS
DGDIVRAGQLLVQLQDAEQRARVQVAKVKVIDNQREFDRIRSLVTSQTVAELERDRLQTLIDTSRAELEQAESALRDRAI
TAPFAGRLGLRQVSPGALVTPGTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFTGKVTSIDSRVNPS
TRAVTVRAEIPNPDAKLLPGMLMKIRLIKTSREAIMVPESAIIPLQNRHYVYMVGADNKVDRREVTIGLRKRGWAEIVDG
LALGETIMIRGILKVRPGDQVTPELKEHFSASVASDEENAA

Specific function: May contribute to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=334, Percent_Identity=27.2455089820359, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786668, Length=344, Percent_Identity=29.6511627906977, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789665, Length=343, Percent_Identity=29.1545189504373, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789929, Length=385, Percent_Identity=26.7532467532467, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39328; Mature: 39328

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAFLLALVGGAGAWYLYSLDESTGGPARPRPVPNVVVTKVATQEVRDEVEALGTTHA
CHHHHEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCC
NESVTITAKVTDVATKVNFSDGDIVRAGQLLVQLQDAEQRARVQVAKVKVIDNQREFDRI
CCEEEEEEEEEEEEEEEECCCCCEEEECEEEEEECCHHHHHHEEEEEEEEECCCHHHHHH
RSLVTSQTVAELERDRLQTLIDTSRAELEQAESALRDRAITAPFAGRLGLRQVSPGALVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEC
PGTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFTGKVTSIDSRVNPS
CCCEEEEECCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECCEEEECEEEECCCCCCCC
TRAVTVRAEIPNPDAKLLPGMLMKIRLIKTSREAIMVPESAIIPLQNRHYVYMVGADNKV
CEEEEEEEECCCCCHHHHHHHHHEEEEEECCCCEEECCCCEEEEECCCCEEEEECCCCCC
DRREVTIGLRKRGWAEIVDGLALGETIMIRGILKVRPGDQVTPELKEHFSASVASDEENA
CCEEEEEEHHCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCC
A
C
>Mature Secondary Structure
MKKIAFLLALVGGAGAWYLYSLDESTGGPARPRPVPNVVVTKVATQEVRDEVEALGTTHA
CHHHHEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCC
NESVTITAKVTDVATKVNFSDGDIVRAGQLLVQLQDAEQRARVQVAKVKVIDNQREFDRI
CCEEEEEEEEEEEEEEEECCCCCEEEECEEEEEECCHHHHHHEEEEEEEEECCCHHHHHH
RSLVTSQTVAELERDRLQTLIDTSRAELEQAESALRDRAITAPFAGRLGLRQVSPGALVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEC
PGTAVTTLDDISTIKLDFAVPERFLPQLHPGKAVEAQAVAYEGQLFTGKVTSIDSRVNPS
CCCEEEEECCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECCEEEECEEEECCCCCCCC
TRAVTVRAEIPNPDAKLLPGMLMKIRLIKTSREAIMVPESAIIPLQNRHYVYMVGADNKV
CEEEEEEEECCCCCHHHHHHHHHEEEEEECCCCEEECCCCEEEEECCCCEEEEECCCCCC
DRREVTIGLRKRGWAEIVDGLALGETIMIRGILKVRPGDQVTPELKEHFSASVASDEENA
CCEEEEEEHHCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]