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The map label for this gene is nlpB [H]

Identifier: 119775042

GI number: 119775042

Start: 2335388

End: 2336452

Strand: Reverse

Name: nlpB [H]

Synonym: Sama_1907

Alternate gene names: 119775042

Gene position: 2336452-2335388 (Counterclockwise)

Preceding gene: 119775043

Following gene: 119775041

Centisome position: 54.26

GC content: 51.64

Gene sequence:

>1065_bases
ATGGCAGCTGGTTGCACCACGCCAATGGAGCGCCGTCAGGCCAACGGGAACGATGAGTACGTGAACGCACAAACCACAGC
GCCACTGAAAGTACCTGAAGGGCTCAAGTCCCCCAACTACAGCCGTGAATACGATATTCCGACTCTGGGTGCCAAGGCCA
ATCGTGAATTGGTTGGTAAAAACCTCGATATACGTCCACCGCTGCAGGTGCTGCCAATGGCGGAAGGCACGCGGGTGGAA
GAAGGTTCGGATAACGTAAAGGTCATTGTTGAGTCGTTCGACAACAGCCTGGATCTGAAACAGGAGATTTTTGGTCTGCT
CAAAGATCATCTGCAAAGCCGTAACATTGAGATAGTAAAAGAAGACTTTGCTTCAGGCACTCTGGAAACCGGTTGGATTG
AAACCCAGGAAGTGTTGGAGTCCAGTCTCTGGGGCTCAGACAAGGTCTTTAACCTGAAACAGCGTTACCAGTATCAGGTG
GAAGTTCGCCCACATGGCCGCACCGGTGCTGTGATCATTAACTTGGTTGACCATCAGGAAAGCTATGATGGCGATGATTT
GAAGACTGCGCTTTCCGCTGACGATAAGCGTCGTTACGCCATTGATATGCTCAACAACTCTATTGCCTATATGGCAGTGA
AGCGTGAACAGGCCATCAAGGCCAAGCGCGTCCGCGAAAGTCTGGGCATTGGTGTAGAGCTGGTGGATGGCGCTGAAGAG
GGCGATGCCTTTTATTTGGCCCAAGGCGATTTCAATCAGGTATGGGGTCGTTTGCGCCTGGTACTGCCCGAAATGGGCTT
CGAAATTGCTGATATGGACAGCAGCAAAGGGGTTTACTTCCTGAACTACAGCGACAATTCCGGATTCTGGAGTTCGCTGT
GGGGCGATGCCAAGCTTGAGCTGAGTAAGGGCACCTATAAGCTTAACGTCAAAGATGGTGAAACCAAGGGCACCAGCGAG
TTGCATATCCTCGATAAGGAAGACAGCCCACTGGCCGACGAGAAGGTCGCTCAGATTTACCGTGCGCTTGCCGAGTTAAT
GAAAGAAGAGCGAAAAGTCCGCTGA

Upstream 100 bases:

>100_bases
TGAGTCCTGCCATGGTCTACTGCTCGATGCCATGAAAAAAGCTGGACTGGAGGTCTAAGTCTTGAAGTTGAAACAAATTA
CCCCATTCGTTCTCGTTGCC

Downstream 100 bases:

>100_bases
TTACCTATGCGTAATTCTGGTTGACAGACTCGCTCCAATAAATCCGCTTGCTTTTAAAGCAGCCAATAAAAAAGAGGCCT
TAAGGCCTCTTTTTTATTGG

Product: lipoprotein-34 NlpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAAGCTTPMERRQANGNDEYVNAQTTAPLKVPEGLKSPNYSREYDIPTLGAKANRELVGKNLDIRPPLQVLPMAEGTRVE
EGSDNVKVIVESFDNSLDLKQEIFGLLKDHLQSRNIEIVKEDFASGTLETGWIETQEVLESSLWGSDKVFNLKQRYQYQV
EVRPHGRTGAVIINLVDHQESYDGDDLKTALSADDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELVDGAEE
GDAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYSDNSGFWSSLWGDAKLELSKGTYKLNVKDGETKGTSE
LHILDKEDSPLADEKVAQIYRALAELMKEERKVR

Sequences:

>Translated_354_residues
MAAGCTTPMERRQANGNDEYVNAQTTAPLKVPEGLKSPNYSREYDIPTLGAKANRELVGKNLDIRPPLQVLPMAEGTRVE
EGSDNVKVIVESFDNSLDLKQEIFGLLKDHLQSRNIEIVKEDFASGTLETGWIETQEVLESSLWGSDKVFNLKQRYQYQV
EVRPHGRTGAVIINLVDHQESYDGDDLKTALSADDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELVDGAEE
GDAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYSDNSGFWSSLWGDAKLELSKGTYKLNVKDGETKGTSE
LHILDKEDSPLADEKVAQIYRALAELMKEERKVR
>Mature_353_residues
AAGCTTPMERRQANGNDEYVNAQTTAPLKVPEGLKSPNYSREYDIPTLGAKANRELVGKNLDIRPPLQVLPMAEGTRVEE
GSDNVKVIVESFDNSLDLKQEIFGLLKDHLQSRNIEIVKEDFASGTLETGWIETQEVLESSLWGSDKVFNLKQRYQYQVE
VRPHGRTGAVIINLVDHQESYDGDDLKTALSADDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELVDGAEEG
DAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYSDNSGFWSSLWGDAKLELSKGTYKLNVKDGETKGTSEL
HILDKEDSPLADEKVAQIYRALAELMKEERKVR

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=337, Percent_Identity=28.7833827893175, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 39764; Mature: 39633

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGCTTPMERRQANGNDEYVNAQTTAPLKVPEGLKSPNYSREYDIPTLGAKANRELVGK
CCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
NLDIRPPLQVLPMAEGTRVEEGSDNVKVIVESFDNSLDLKQEIFGLLKDHLQSRNIEIVK
CCCCCCCHHEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
EDFASGTLETGWIETQEVLESSLWGSDKVFNLKQRYQYQVEVRPHGRTGAVIINLVDHQE
HHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEECCCC
SYDGDDLKTALSADDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELVDGAEE
CCCCCHHHHHHCCCCCHHEEHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCC
GDAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYSDNSGFWSSLWGDAKLE
CCEEEEECCCHHHHHHHHEEEEHHCCCEEECCCCCCCEEEEEECCCCCHHHHHCCCEEEE
LSKGTYKLNVKDGETKGTSELHILDKEDSPLADEKVAQIYRALAELMKEERKVR
EECCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAGCTTPMERRQANGNDEYVNAQTTAPLKVPEGLKSPNYSREYDIPTLGAKANRELVGK
CCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
NLDIRPPLQVLPMAEGTRVEEGSDNVKVIVESFDNSLDLKQEIFGLLKDHLQSRNIEIVK
CCCCCCCHHEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
EDFASGTLETGWIETQEVLESSLWGSDKVFNLKQRYQYQVEVRPHGRTGAVIINLVDHQE
HHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEECCCC
SYDGDDLKTALSADDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELVDGAEE
CCCCCHHHHHHCCCCCHHEEHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCC
GDAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYSDNSGFWSSLWGDAKLE
CCEEEEECCCHHHHHHHHEEEEHHCCCEEECCCCCCCEEEEEECCCCCHHHHHCCCEEEE
LSKGTYKLNVKDGETKGTSELHILDKEDSPLADEKVAQIYRALAELMKEERKVR
EECCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]