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The map label for this gene is rmuC [H]

Identifier: 119775029

GI number: 119775029

Start: 2309910

End: 2311472

Strand: Direct

Name: rmuC [H]

Synonym: Sama_1894

Alternate gene names: 119775029

Gene position: 2309910-2311472 (Clockwise)

Preceding gene: 119775026

Following gene: 119775030

Centisome position: 53.64

GC content: 50.16

Gene sequence:

>1563_bases
ATGACGCCGCTTGACCTTTTTTCTCTTCCCCAATGGATAGCCATTTCCGCCCTTTGTTTTCTTTTTCTGATGATCGGGGC
TCTCATTAATCAGATCCTCACCCGTAAACGCTGGGAAAGCCTTGATGCACTGCGTATTGAGCAGCATCAAGCCGCCATCT
GCGCCCTTGAATCACAATTGGACGAGCACAAAAACCAACTCGACGATAAAGAAGACCGACTGAGCTTTTTTCAAAACCGC
ATTGAGGAAGTCAGCCAACGTTACGGTGAAGCCAAGGCTGAGGCACAGCGGTTACCCGAACTTGAGCAAAAGCTGGCCGA
CACCCATAGACAATTGATGGAAGCCCGGCTGGAAACCGCCAAGGCCATCGCCATGCAACAGAGCATCAGTGCCAAGTTTG
ACGCCGAGCGGCAGGCGTTCGAAGAAAAGCTGGCCCTGCTGGAATCAGCAGAAGCCCGGTTAAAATTGCAGTTTGAAAAC
CTTGCAAACAAAATTTTTGAACAGAGAGCGGAGCAGCTTAAAGGGCAGAATTTATTGCAGCTTGATGCGGTAATCGGCCC
TCTAAAACAACAAATTGACGGTTTCAGAAAACAAGTCAATGAATCCTATTCAATTGAACAGGCCGAGCGCAGTAGCCTTA
AACATCAGCTCGAACAACTGGCATCCCTTAATGTGAAGATGAGCCAGGACGCCATCAACCTGACCAACGCCCTCAAAGGT
GACAATAAACAGCAGGGCAACTGGGGAGAAGTCATACTGGAGCGGGTGCTCAGTGAAAGCGGCCTGCGTGAAGGTCACGA
GTACCACACCCAGCAAGAATTGAAGGCCGAGAATGGACAAAAGTTCAAACCCGACGTGATAGTCCACCTGCCCGGCGAAA
AAGACGTGGTGATAGACGCCAAAATGTCGCTCACCGCTTATGAGCGCTATTTTAACGCCAGCGAGGATGCCGACAAGGCA
CAGGCCCTCAAAGAGCATGTACTGTCGGTCAGAAGCCATATCAAGTTGCTCTCACAAAAGGATTATCAACACCTCCACGG
CCTTAAAACCCTCGATTATGTGTTGATGTTTATTCCTGTGGAACCCGCCTTTTTATTGGCACTTGAGCAGGAGCCGGGAC
TGGTTGGCTACGCCCTTGAACACAATATTATGCTTGCCAGCCCAACCAATTTGTTGGTTGCCCTGCGCACAATTCACAAT
ATCTGGCGATACGAATATCAGAATCTGCATGCACAGCACATCGCTAAGGCCGCGGGCAAAATCTACGACAAACTCTGTAT
TTATGTGGACGAAATGGACAAGTTAGGTCGCTCGCTGGACACGGCGCAGAAAAGTTTTCAATCAGCGATGGGCAAACTCT
CCACCGGCCGCGGTAATCTTATTCGTCAAGCCCATCAAATGCGCCAGCTTGGCGTTGAAAGCAGTAAACAGCTAGACAAG
CAACTGCTTGACAACGCCCTTGACGACAGCATGGAAGCCGGAGAGGACGACGATACTGTAGCCGACACTCTGGCCGTCAA
TGGTTCAACGCCAGTGCCACATCTGACTAACCAGAGACAGTAA

Upstream 100 bases:

>100_bases
TGATTTTTTCTTCAGCTGACCAATTATCATTCTTAAGCCCCTTGAAGGCGGTATTCGACCATGCCAAGCTTAGCGCCATC
AGTCCGGTTTAAGGAATACC

Downstream 100 bases:

>100_bases
TCACGGAGGAACTTGCACCATGCTGAAGCAGTTTTACGGCATTTGTCTCACATCACTCATCTTCATCAGCCCGCTGGTGT
CTGCCGATATCAAGGATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTPLDLFSLPQWIAISALCFLFLMIGALINQILTRKRWESLDALRIEQHQAAICALESQLDEHKNQLDDKEDRLSFFQNR
IEEVSQRYGEAKAEAQRLPELEQKLADTHRQLMEARLETAKAIAMQQSISAKFDAERQAFEEKLALLESAEARLKLQFEN
LANKIFEQRAEQLKGQNLLQLDAVIGPLKQQIDGFRKQVNESYSIEQAERSSLKHQLEQLASLNVKMSQDAINLTNALKG
DNKQQGNWGEVILERVLSESGLREGHEYHTQQELKAENGQKFKPDVIVHLPGEKDVVIDAKMSLTAYERYFNASEDADKA
QALKEHVLSVRSHIKLLSQKDYQHLHGLKTLDYVLMFIPVEPAFLLALEQEPGLVGYALEHNIMLASPTNLLVALRTIHN
IWRYEYQNLHAQHIAKAAGKIYDKLCIYVDEMDKLGRSLDTAQKSFQSAMGKLSTGRGNLIRQAHQMRQLGVESSKQLDK
QLLDNALDDSMEAGEDDDTVADTLAVNGSTPVPHLTNQRQ

Sequences:

>Translated_520_residues
MTPLDLFSLPQWIAISALCFLFLMIGALINQILTRKRWESLDALRIEQHQAAICALESQLDEHKNQLDDKEDRLSFFQNR
IEEVSQRYGEAKAEAQRLPELEQKLADTHRQLMEARLETAKAIAMQQSISAKFDAERQAFEEKLALLESAEARLKLQFEN
LANKIFEQRAEQLKGQNLLQLDAVIGPLKQQIDGFRKQVNESYSIEQAERSSLKHQLEQLASLNVKMSQDAINLTNALKG
DNKQQGNWGEVILERVLSESGLREGHEYHTQQELKAENGQKFKPDVIVHLPGEKDVVIDAKMSLTAYERYFNASEDADKA
QALKEHVLSVRSHIKLLSQKDYQHLHGLKTLDYVLMFIPVEPAFLLALEQEPGLVGYALEHNIMLASPTNLLVALRTIHN
IWRYEYQNLHAQHIAKAAGKIYDKLCIYVDEMDKLGRSLDTAQKSFQSAMGKLSTGRGNLIRQAHQMRQLGVESSKQLDK
QLLDNALDDSMEAGEDDDTVADTLAVNGSTPVPHLTNQRQ
>Mature_519_residues
TPLDLFSLPQWIAISALCFLFLMIGALINQILTRKRWESLDALRIEQHQAAICALESQLDEHKNQLDDKEDRLSFFQNRI
EEVSQRYGEAKAEAQRLPELEQKLADTHRQLMEARLETAKAIAMQQSISAKFDAERQAFEEKLALLESAEARLKLQFENL
ANKIFEQRAEQLKGQNLLQLDAVIGPLKQQIDGFRKQVNESYSIEQAERSSLKHQLEQLASLNVKMSQDAINLTNALKGD
NKQQGNWGEVILERVLSESGLREGHEYHTQQELKAENGQKFKPDVIVHLPGEKDVVIDAKMSLTAYERYFNASEDADKAQ
ALKEHVLSVRSHIKLLSQKDYQHLHGLKTLDYVLMFIPVEPAFLLALEQEPGLVGYALEHNIMLASPTNLLVALRTIHNI
WRYEYQNLHAQHIAKAAGKIYDKLCIYVDEMDKLGRSLDTAQKSFQSAMGKLSTGRGNLIRQAHQMRQLGVESSKQLDKQ
LLDNALDDSMEAGEDDDTVADTLAVNGSTPVPHLTNQRQ

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=359, Percent_Identity=54.3175487465181, Blast_Score=412, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 59022; Mature: 58891

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLDLFSLPQWIAISALCFLFLMIGALINQILTRKRWESLDALRIEQHQAAICALESQL
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEHKNQLDDKEDRLSFFQNRIEEVSQRYGEAKAEAQRLPELEQKLADTHRQLMEARLETA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
KAIAMQQSISAKFDAERQAFEEKLALLESAEARLKLQFENLANKIFEQRAEQLKGQNLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LDAVIGPLKQQIDGFRKQVNESYSIEQAERSSLKHQLEQLASLNVKMSQDAINLTNALKG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCC
DNKQQGNWGEVILERVLSESGLREGHEYHTQQELKAENGQKFKPDVIVHLPGEKDVVIDA
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEC
KMSLTAYERYFNASEDADKAQALKEHVLSVRSHIKLLSQKDYQHLHGLKTLDYVLMFIPV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPAFLLALEQEPGLVGYALEHNIMLASPTNLLVALRTIHNIWRYEYQNLHAQHIAKAAGK
CCEEEEEEECCCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDKLCIYVDEMDKLGRSLDTAQKSFQSAMGKLSTGRGNLIRQAHQMRQLGVESSKQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
QLLDNALDDSMEAGEDDDTVADTLAVNGSTPVPHLTNQRQ
HHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TPLDLFSLPQWIAISALCFLFLMIGALINQILTRKRWESLDALRIEQHQAAICALESQL
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEHKNQLDDKEDRLSFFQNRIEEVSQRYGEAKAEAQRLPELEQKLADTHRQLMEARLETA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
KAIAMQQSISAKFDAERQAFEEKLALLESAEARLKLQFENLANKIFEQRAEQLKGQNLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LDAVIGPLKQQIDGFRKQVNESYSIEQAERSSLKHQLEQLASLNVKMSQDAINLTNALKG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCC
DNKQQGNWGEVILERVLSESGLREGHEYHTQQELKAENGQKFKPDVIVHLPGEKDVVIDA
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEC
KMSLTAYERYFNASEDADKAQALKEHVLSVRSHIKLLSQKDYQHLHGLKTLDYVLMFIPV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPAFLLALEQEPGLVGYALEHNIMLASPTNLLVALRTIHNIWRYEYQNLHAQHIAKAAGK
CCEEEEEEECCCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDKLCIYVDEMDKLGRSLDTAQKSFQSAMGKLSTGRGNLIRQAHQMRQLGVESSKQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
QLLDNALDDSMEAGEDDDTVADTLAVNGSTPVPHLTNQRQ
HHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]