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The map label for this gene is yafS [H]

Identifier: 119775018

GI number: 119775018

Start: 2298238

End: 2298960

Strand: Reverse

Name: yafS [H]

Synonym: Sama_1883

Alternate gene names: 119775018

Gene position: 2298960-2298238 (Counterclockwise)

Preceding gene: 119775021

Following gene: 119775017

Centisome position: 53.39

GC content: 53.39

Gene sequence:

>723_bases
ATGACAGATTCGCCGACACCATGGCAGGCCTTGCCAGCGCATCCCCAGTTGCAGGCGGCGGTTGAAAATACCCTTAATGC
CTGGTGGCCAAAGGTGTTCGGCTATCATTTGCTTAAAATGGGTGCGTTTTCCTCGGCCATCGACACCCATAGATGCAGTA
TCAGTCACCAAATCTCACTGGACTGTGCCCCGGGCGGTGGAGTTCAGGCCGATTTCCATCAGTTACCTTTTCAAAATGCC
TGTATAGATGCCGCACTGATGAGCTTGTTGCTTGAGTTTGAAGAGGACCCTTACCGGATCCTTCGTGAAACAGACCGGGT
ACTCATCAGCGGTGGTTATTTGTTTATTGTGGGTTTTAATCCCCTGAGCAGCCTGTTTTTTGGAAAGTTGCTGCCTTCCT
TACGACAGCGTGCGCCCTGGCATGGCCGCTTCTTTTTACCTTCTAGGGTCAGGGATTGGCTTAGTGTTCTTGGCTATCAG
GTGATCAGCGATGAGCGCTTCTTCTACCATCCGCTAATAGGCGACCCCAACAGATTCGCGTTTTGGCAGGATGTCCTGCA
TGCCTGGCTACCCGGTGCAGGCAGCCTGTATTTACTGGTTGCCCGTAAAGTGGACATACCGCTAACCCCACTTGCCGATA
AGTGGAAAGTCGCCCAACCCAAATGGACGACCGCAGCCACTGCAGGCCGTGCCGGTCGGGTTGTCGGAGCAAACGAGCGA
TGA

Upstream 100 bases:

>100_bases
ATGAGGTGAAACAGAGTCCTTTAATAGGGAAGGGGTTGGTGCAATAGGTAAAAGAATTAATGTATGCTATTGCCAAGTTT
AGGCTTTTTATCGAGCTCCC

Downstream 100 bases:

>100_bases
AAATGACCCTCAGGCAGCTTGAGGTGTTCGAAGCCATTGCCCGCTCGGGGCAGGTGAGTAAAGCCGCTCAGTGGCTTGGG
ATGACGGGGCCGGCAGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTDSPTPWQALPAHPQLQAAVENTLNAWWPKVFGYHLLKMGAFSSAIDTHRCSISHQISLDCAPGGGVQADFHQLPFQNA
CIDAALMSLLLEFEEDPYRILRETDRVLISGGYLFIVGFNPLSSLFFGKLLPSLRQRAPWHGRFFLPSRVRDWLSVLGYQ
VISDERFFYHPLIGDPNRFAFWQDVLHAWLPGAGSLYLLVARKVDIPLTPLADKWKVAQPKWTTAATAGRAGRVVGANER

Sequences:

>Translated_240_residues
MTDSPTPWQALPAHPQLQAAVENTLNAWWPKVFGYHLLKMGAFSSAIDTHRCSISHQISLDCAPGGGVQADFHQLPFQNA
CIDAALMSLLLEFEEDPYRILRETDRVLISGGYLFIVGFNPLSSLFFGKLLPSLRQRAPWHGRFFLPSRVRDWLSVLGYQ
VISDERFFYHPLIGDPNRFAFWQDVLHAWLPGAGSLYLLVARKVDIPLTPLADKWKVAQPKWTTAATAGRAGRVVGANER
>Mature_239_residues
TDSPTPWQALPAHPQLQAAVENTLNAWWPKVFGYHLLKMGAFSSAIDTHRCSISHQISLDCAPGGGVQADFHQLPFQNAC
IDAALMSLLLEFEEDPYRILRETDRVLISGGYLFIVGFNPLSSLFFGKLLPSLRQRAPWHGRFFLPSRVRDWLSVLGYQV
ISDERFFYHPLIGDPNRFAFWQDVLHAWLPGAGSLYLLVARKVDIPLTPLADKWKVAQPKWTTAATAGRAGRVVGANER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=232, Percent_Identity=39.2241379310345, Blast_Score=154, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26969; Mature: 26838

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSPTPWQALPAHPQLQAAVENTLNAWWPKVFGYHLLKMGAFSSAIDTHRCSISHQISL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
DCAPGGGVQADFHQLPFQNACIDAALMSLLLEFEEDPYRILRETDRVLISGGYLFIVGFN
EECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCEEEEEECC
PLSSLFFGKLLPSLRQRAPWHGRFFLPSRVRDWLSVLGYQVISDERFFYHPLIGDPNRFA
HHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
FWQDVLHAWLPGAGSLYLLVARKVDIPLTPLADKWKVAQPKWTTAATAGRAGRVVGANER
HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDSPTPWQALPAHPQLQAAVENTLNAWWPKVFGYHLLKMGAFSSAIDTHRCSISHQISL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
DCAPGGGVQADFHQLPFQNACIDAALMSLLLEFEEDPYRILRETDRVLISGGYLFIVGFN
EECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCEEEEEECC
PLSSLFFGKLLPSLRQRAPWHGRFFLPSRVRDWLSVLGYQVISDERFFYHPLIGDPNRFA
HHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
FWQDVLHAWLPGAGSLYLLVARKVDIPLTPLADKWKVAQPKWTTAATAGRAGRVVGANER
HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]