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The map label for this gene is rimK [H]

Identifier: 119774982

GI number: 119774982

Start: 2250047

End: 2250766

Strand: Direct

Name: rimK [H]

Synonym: Sama_1847

Alternate gene names: 119774982

Gene position: 2250047-2250766 (Clockwise)

Preceding gene: 119774981

Following gene: 119774983

Centisome position: 52.25

GC content: 51.53

Gene sequence:

>720_bases
ATGTTCAAACATACCCTGGCCGTTGCCATCATCGCCGTATGTGCAGGTTGCAGCACTACCTCCAAACCCGAAGTTGCAGG
CCCTGCCCCGCTAAATGCCCAAGAGCTGAAAGCCAACCTCGATAACAGTGAAGCGCGCATGATGGCCGTTATCGATAAGG
GAAATCTGGATACACAAGCCAAACTTTCTGAACTGAACAGCGCCATCGCAGCCCTGGATAAAAACCTCGCGACATTCAAG
CAAAATAATCAAATGACTGCGGCCGCAGTAGTACCTGTCGAATGTCCGCCCAGTGCCATCGGCGACAAGTTCATGCTGGG
GGAAGTCGAAAAAGTCTTCATCGACGAACTTAAAGCCAGCTTTCACACCCGCATCGACACGGGGGCTGAAAGCTCGTCAC
TGGATGCCCGCAACATCCTCCTGTTTGAGCGAGACGGCGAACAATGGGTGCGCTTCGATGTGATGGTACAGGGAGAATCC
AAACCGGCCTCCACCTATGAGTCAAAAGTGGTGCGTTTTGTGCGCATTAAACAGGAAGGCGATGTGGACGACCGTCGTCC
TGTTATTCACGCCCACCTTAAAATCGGCAAATACAGCGCCGAAACCGATCTGAATCTAACCGACCGCAGCCATCTGGATT
ATCCCTTGTTGCTTGGCCGTAAATTTATCAAAGACATTGCAGTTGTGGATGTCAGCCAGCAGTTCATTCACGGAAAGTAA

Upstream 100 bases:

>100_bases
TATCCGGCACCCAAGCGGGCCACCTTCATTGCGGTAAAGAACCGCAGTCCACAGGATGCAGACTGAGACAAGAACCGCTA
TCGAAAGGGAAGCAAAGACT

Downstream 100 bases:

>100_bases
CAGATCTCAAGAGCAAAGGAGCGCAGATGCACTCACGTAAGCCATTTTATATTTTCGTTTTTTTATTGGTTGTCCTTGGG
ATCTCCAGCAGTATTTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MFKHTLAVAIIAVCAGCSTTSKPEVAGPAPLNAQELKANLDNSEARMMAVIDKGNLDTQAKLSELNSAIAALDKNLATFK
QNNQMTAAAVVPVECPPSAIGDKFMLGEVEKVFIDELKASFHTRIDTGAESSSLDARNILLFERDGEQWVRFDVMVQGES
KPASTYESKVVRFVRIKQEGDVDDRRPVIHAHLKIGKYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVSQQFIHGK

Sequences:

>Translated_239_residues
MFKHTLAVAIIAVCAGCSTTSKPEVAGPAPLNAQELKANLDNSEARMMAVIDKGNLDTQAKLSELNSAIAALDKNLATFK
QNNQMTAAAVVPVECPPSAIGDKFMLGEVEKVFIDELKASFHTRIDTGAESSSLDARNILLFERDGEQWVRFDVMVQGES
KPASTYESKVVRFVRIKQEGDVDDRRPVIHAHLKIGKYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVSQQFIHGK
>Mature_239_residues
MFKHTLAVAIIAVCAGCSTTSKPEVAGPAPLNAQELKANLDNSEARMMAVIDKGNLDTQAKLSELNSAIAALDKNLATFK
QNNQMTAAAVVPVECPPSAIGDKFMLGEVEKVFIDELKASFHTRIDTGAESSSLDARNILLFERDGEQWVRFDVMVQGES
KPASTYESKVVRFVRIKQEGDVDDRRPVIHAHLKIGKYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVSQQFIHGK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 26268; Mature: 26268

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKHTLAVAIIAVCAGCSTTSKPEVAGPAPLNAQELKANLDNSEARMMAVIDKGNLDTQA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCHHH
KLSELNSAIAALDKNLATFKQNNQMTAAAVVPVECPPSAIGDKFMLGEVEKVFIDELKAS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
FHTRIDTGAESSSLDARNILLFERDGEQWVRFDVMVQGESKPASTYESKVVRFVRIKQEG
HHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHEEEEEEECCC
DVDDRRPVIHAHLKIGKYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVSQQFIHGK
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKHTLAVAIIAVCAGCSTTSKPEVAGPAPLNAQELKANLDNSEARMMAVIDKGNLDTQA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCHHH
KLSELNSAIAALDKNLATFKQNNQMTAAAVVPVECPPSAIGDKFMLGEVEKVFIDELKAS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
FHTRIDTGAESSSLDARNILLFERDGEQWVRFDVMVQGESKPASTYESKVVRFVRIKQEG
HHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHEEEEEEECCC
DVDDRRPVIHAHLKIGKYSAETDLNLTDRSHLDYPLLLGRKFIKDIAVVDVSQQFIHGK
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA