| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is gloA [H]
Identifier: 119774972
GI number: 119774972
Start: 2236858
End: 2237268
Strand: Direct
Name: gloA [H]
Synonym: Sama_1837
Alternate gene names: 119774972
Gene position: 2236858-2237268 (Clockwise)
Preceding gene: 119774971
Following gene: 119774980
Centisome position: 51.95
GC content: 52.55
Gene sequence:
>411_bases ATGTCTCAAATTCTTCATACCATGGTTCGGGTTGCCAATCTTGAGAAATCCATCGCCTTCTACACTGAGGTGCTGGGCAT GACGCTGCTTCGCACCTCAGAAAATCCTGAGTATCGTTATTCACTGGCTTTTGTGGGCTATGGCGAAGAAGCCAAGGGCG CGGCCGTCATTGAGCTGACCTGGAACTGGGATACCGACAAGTACGAACTTGGCACTGGCTTTGGCCATATCGCCATCGGT AAAGCAGATATTTACAAGGCCTGCGAAGACATCGCCAAGGCCGGCGGTAAAGTTACCCGCGCGCCTGGTCCTGTTGCCGG TGGCACTACGGAAATCGCCTTCGTTGAAGACCCCGATGGTTACAAGATTGAACTCATCCAGATGAAATCTGCCATGCAAG GCCTTGGCTGA
Upstream 100 bases:
>100_bases GTCAAACTGTGAGTTGCTTCAGATTTCTCCTTTTGTTCCCTGTAAGCAGTACGTTTTTGCTATACTGGCCGCCATCTTAA TGCCGTTAAAGGAACCCCAA
Downstream 100 bases:
>100_bases TTTTACCGGAGCGACGCTGACTGAGTGAGGCTTTGACTCCCGTAATAAAAAAGCGCCCATGGGGCGCTTTTTTGTTTCTG CGTTAAAGTGTCTGATAGTT
Product: lactoylglutathione lyase
Products: NA
Alternate protein names: Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase [H]
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSQILHTMVRVANLEKSIAFYTEVLGMTLLRTSENPEYRYSLAFVGYGEEAKGAAVIELTWNWDTDKYELGTGFGHIAIG KADIYKACEDIAKAGGKVTRAPGPVAGGTTEIAFVEDPDGYKIELIQMKSAMQGLG
Sequences:
>Translated_136_residues MSQILHTMVRVANLEKSIAFYTEVLGMTLLRTSENPEYRYSLAFVGYGEEAKGAAVIELTWNWDTDKYELGTGFGHIAIG KADIYKACEDIAKAGGKVTRAPGPVAGGTTEIAFVEDPDGYKIELIQMKSAMQGLG >Mature_135_residues SQILHTMVRVANLEKSIAFYTEVLGMTLLRTSENPEYRYSLAFVGYGEEAKGAAVIELTWNWDTDKYELGTGFGHIAIGK ADIYKACEDIAKAGGKVTRAPGPVAGGTTEIAFVEDPDGYKIELIQMKSAMQGLG
Specific function: Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glyoxalase I family [H]
Homologues:
Organism=Homo sapiens, GI118402586, Length=147, Percent_Identity=35.3741496598639, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1787940, Length=134, Percent_Identity=67.910447761194, Blast_Score=185, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6323639, Length=140, Percent_Identity=39.2857142857143, Blast_Score=96, Evalue=2e-21, Organism=Drosophila melanogaster, GI20129743, Length=149, Percent_Identity=38.255033557047, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI19920404, Length=138, Percent_Identity=32.6086956521739, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR004361 - InterPro: IPR018146 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =4.4.1.5 [H]
Molecular weight: Translated: 14770; Mature: 14639
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00934 GLYOXALASE_I_1 ; PS00935 GLYOXALASE_I_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQILHTMVRVANLEKSIAFYTEVLGMTLLRTSENPEYRYSLAFVGYGEEAKGAAVIELT CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCEEEEEEE WNWDTDKYELGTGFGHIAIGKADIYKACEDIAKAGGKVTRAPGPVAGGTTEIAFVEDPDG ECCCCCEEECCCCCCEEEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCC YKIELIQMKSAMQGLG CEEEEEEEHHHHHCCC >Mature Secondary Structure SQILHTMVRVANLEKSIAFYTEVLGMTLLRTSENPEYRYSLAFVGYGEEAKGAAVIELT HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCEEEEEEE WNWDTDKYELGTGFGHIAIGKADIYKACEDIAKAGGKVTRAPGPVAGGTTEIAFVEDPDG ECCCCCEEECCCCCCEEEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEECCCC YKIELIQMKSAMQGLG CEEEEEEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739; 8021208 [H]