Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774952

Identifier: 119774952

GI number: 119774952

Start: 2213192

End: 2215048

Strand: Direct

Name: 119774952

Synonym: Sama_1817

Alternate gene names: NA

Gene position: 2213192-2215048 (Clockwise)

Preceding gene: 119774949

Following gene: 119774954

Centisome position: 51.4

GC content: 54.33

Gene sequence:

>1857_bases
TTGTTACGCCCCGCCAAATTGGCCTTGGGTGTAGCCCTTGCACTCGGCCTCAGCGCCTGTCAGGACGAGCAGCACTCAGT
TGCTGTTAATAAAGACGTTGCTGCAGTTACTGCGGTGTCCTCTAACGTATCCACCCAGGATGCGATTGATTTTATCAATC
AGGCGGAAGCCGAGCTTGCCGCGCTGTCTCTAGAGGCTAACCGTGCAGAGTGGATATACAGTAACTTTATCACCGAAGAC
ACAGCATCCTTATCGGCCGCAGTTAACGAAAAGGTGACCGCCACGTCGGTACGTTTAGCCACTGAAGCTGCCAAATTTGC
GGAAGTTGAGCTTGATGCCGTGAACGCCCGTAAGCTCAATATGCTCAGAAGCGCACTGGTTCTGCCCTCGCCACTCGATC
CTGCAAAAAATGCCGAGCTGGCCGGTATCGTTGCCCAGCTCAACGGCCTCTATGGCAAAGGCAAATACTGCTTTGCCGAT
GGTCGCTGCCTGACCCAGCCAGAGCTCTCTGCCCTGATGGCCGAATCCCGTGACCCTGAACTCTTAAAAGAAATCTGGGC
TGGCTGGCGTGACATTGCCAAACCCATGCGTCCGCTGTTCGAACGCGAAGTGGTACTTGCCAATGAAGGAGCCAAAGACC
TGGGCTTTGCCAATTTGTCTGAGCTGTGGCGCAGTCAATACGATATGGCGCCTGATGCATTTTCCACCGAACTTGACCGC
CTCTGGGGTCAGGTAAAACCGCTTTATGATTCGCTGCATTGTTATGTGCGTGGTGAGCTCAACGCGCAATACGGCGACGA
TGTGGTGCCAAGAACCGGTCCAATCCCGGCACATCTCCTGGGTAACATGTGGGCCCAGCAGTGGGGCACCATTTACCCTC
TCGTTGCACCAAAGGATGCTGACCCAGGCTATGACGTGACAGCCCTGCTTGCCAAACAGGGTTACGATGAGCACAAAATG
GTGCAGCAGGCCGAGAGCTTCTTTACTTCACTGGGTTTTGACAAGCTCCCCGATACCTTCTGGAGCCGTTCATTATTCGT
GCAGCCCAAAGACCGTGATGTCGTCTGTCACGCCTCTGCCTGGGATTTGGATAACGCGGATGATATCCGTATCAAGATGT
GTATCCAGAAAACCGCAGAAGACTTTACCGTGATCCACCACGAGCTGGGCCACAACTTCTACCAGCGTGCTTATAAGAAT
CAGCCTTTTATCTTTAAAAACAGCGCCAACGATGGCTTCCATGAAGCCATTGGCGATACGGTCGCCCTGTCCATCACACC
CAAGTACCTGCAGCAGATTGGTCTGCTGGATACGGTTCCCGATGCGTCAAAAGACATTGGTCTGCTATTAAAACAAGCCC
TGGACAAGGTCGCTTTCCTGCCCTTTGGTCTGATGATTGACCAGTGGCGCTGGAAGGTATTCAGCGGTGAAATCACGCCT
GCGAACTACAACCAGGCATGGTGGGATCTGCGCTTGAAGTATCAGGGTGTGATGGCGCCTGTTGCGCGATCAGAAGCCGA
TTTTGACCCGGGTGCAAAATACCACGTGCCGGGCAATGTCCCTTACACCCGTTACTTCCTGGCTCACATTCTCCAATTCC
AGTTCCACCGTTCCCTGTGCGACGTGGCCGGTGACCAGGGCCCGGTGCATCGCTGCTCGATATACGGCAACCAGGAAGCC
GGCGCCAAGCTCAATCAAATGCTGGAAATGGGTTCGAGCAAGCCCTGGCCCGAAGCGTTGGCCGTGGTGACTGGAAAACA
GGAAATGGACGCCAGCGCCGTACTCGACTATTTTGCGCCGCTGAAAACCTGGCTCGACGAGCAAAACACCCACGCCAATC
GCCAGTGTGGTTGGTAA

Upstream 100 bases:

>100_bases
CATAGTAATTTTTGTGTGTGCTCGTTAGACTTTCGCCGTTCAATAATAACAAGGATGCAACCTGATGACCCAAGCCAAGA
CCCAAACGAAGGTTCACACA

Downstream 100 bases:

>100_bases
GACATTAAGTGAGCCGATGCTGACCTAGACTTCTCTGCTGCCTTTCGGTGGTTAAGCACAGGAATGACAGTCAGCCGCAC
CATCATTGGTCAACATAAAA

Product: peptidyl-dipeptidase A

Products: NA

Alternate protein names: Zinc-Dependent Metallopeptidase; Angiotensin-Converting; Dipeptidyl Carboxypeptidase; Angiotensin-Converting Family Protein; Dipeptidyl Carboxydipeptidase Family; Zinc Metallopeptidase Family Protein; Angiotensin-Converting Peptidyl Dipeptidase Protein; Peptidyl-Dipeptidase Dcp; Dipeptidyl Carboxydipeptidase Family Protein

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MLRPAKLALGVALALGLSACQDEQHSVAVNKDVAAVTAVSSNVSTQDAIDFINQAEAELAALSLEANRAEWIYSNFITED
TASLSAAVNEKVTATSVRLATEAAKFAEVELDAVNARKLNMLRSALVLPSPLDPAKNAELAGIVAQLNGLYGKGKYCFAD
GRCLTQPELSALMAESRDPELLKEIWAGWRDIAKPMRPLFEREVVLANEGAKDLGFANLSELWRSQYDMAPDAFSTELDR
LWGQVKPLYDSLHCYVRGELNAQYGDDVVPRTGPIPAHLLGNMWAQQWGTIYPLVAPKDADPGYDVTALLAKQGYDEHKM
VQQAESFFTSLGFDKLPDTFWSRSLFVQPKDRDVVCHASAWDLDNADDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKN
QPFIFKNSANDGFHEAIGDTVALSITPKYLQQIGLLDTVPDASKDIGLLLKQALDKVAFLPFGLMIDQWRWKVFSGEITP
ANYNQAWWDLRLKYQGVMAPVARSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHRSLCDVAGDQGPVHRCSIYGNQEA
GAKLNQMLEMGSSKPWPEALAVVTGKQEMDASAVLDYFAPLKTWLDEQNTHANRQCGW

Sequences:

>Translated_618_residues
MLRPAKLALGVALALGLSACQDEQHSVAVNKDVAAVTAVSSNVSTQDAIDFINQAEAELAALSLEANRAEWIYSNFITED
TASLSAAVNEKVTATSVRLATEAAKFAEVELDAVNARKLNMLRSALVLPSPLDPAKNAELAGIVAQLNGLYGKGKYCFAD
GRCLTQPELSALMAESRDPELLKEIWAGWRDIAKPMRPLFEREVVLANEGAKDLGFANLSELWRSQYDMAPDAFSTELDR
LWGQVKPLYDSLHCYVRGELNAQYGDDVVPRTGPIPAHLLGNMWAQQWGTIYPLVAPKDADPGYDVTALLAKQGYDEHKM
VQQAESFFTSLGFDKLPDTFWSRSLFVQPKDRDVVCHASAWDLDNADDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKN
QPFIFKNSANDGFHEAIGDTVALSITPKYLQQIGLLDTVPDASKDIGLLLKQALDKVAFLPFGLMIDQWRWKVFSGEITP
ANYNQAWWDLRLKYQGVMAPVARSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHRSLCDVAGDQGPVHRCSIYGNQEA
GAKLNQMLEMGSSKPWPEALAVVTGKQEMDASAVLDYFAPLKTWLDEQNTHANRQCGW
>Mature_618_residues
MLRPAKLALGVALALGLSACQDEQHSVAVNKDVAAVTAVSSNVSTQDAIDFINQAEAELAALSLEANRAEWIYSNFITED
TASLSAAVNEKVTATSVRLATEAAKFAEVELDAVNARKLNMLRSALVLPSPLDPAKNAELAGIVAQLNGLYGKGKYCFAD
GRCLTQPELSALMAESRDPELLKEIWAGWRDIAKPMRPLFEREVVLANEGAKDLGFANLSELWRSQYDMAPDAFSTELDR
LWGQVKPLYDSLHCYVRGELNAQYGDDVVPRTGPIPAHLLGNMWAQQWGTIYPLVAPKDADPGYDVTALLAKQGYDEHKM
VQQAESFFTSLGFDKLPDTFWSRSLFVQPKDRDVVCHASAWDLDNADDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKN
QPFIFKNSANDGFHEAIGDTVALSITPKYLQQIGLLDTVPDASKDIGLLLKQALDKVAFLPFGLMIDQWRWKVFSGEITP
ANYNQAWWDLRLKYQGVMAPVARSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHRSLCDVAGDQGPVHRCSIYGNQEA
GAKLNQMLEMGSSKPWPEALAVVTGKQEMDASAVLDYFAPLKTWLDEQNTHANRQCGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI23238214, Length=596, Percent_Identity=42.1140939597315, Blast_Score=494, Evalue=1e-139,
Organism=Homo sapiens, GI4503273, Length=583, Percent_Identity=42.3670668953688, Blast_Score=491, Evalue=1e-139,
Organism=Homo sapiens, GI295844837, Length=596, Percent_Identity=38.4228187919463, Blast_Score=420, Evalue=1e-117,
Organism=Homo sapiens, GI11225609, Length=601, Percent_Identity=36.7720465890183, Blast_Score=393, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI71985287, Length=583, Percent_Identity=28.3018867924528, Blast_Score=256, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24584232, Length=586, Percent_Identity=40.2730375426621, Blast_Score=441, Evalue=1e-124,
Organism=Drosophila melanogaster, GI17137008, Length=586, Percent_Identity=40.2730375426621, Blast_Score=441, Evalue=1e-124,
Organism=Drosophila melanogaster, GI17137262, Length=592, Percent_Identity=37.1621621621622, Blast_Score=394, Evalue=1e-110,
Organism=Drosophila melanogaster, GI85724942, Length=461, Percent_Identity=40.7809110629067, Blast_Score=385, Evalue=1e-107,
Organism=Drosophila melanogaster, GI22026846, Length=460, Percent_Identity=26.9565217391304, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI28574153, Length=590, Percent_Identity=25.2542372881356, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24762773, Length=484, Percent_Identity=27.8925619834711, Blast_Score=180, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68697; Mature: 68697

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPAKLALGVALALGLSACQDEQHSVAVNKDVAAVTAVSSNVSTQDAIDFINQAEAELA
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHEEEECCCCCCHHHHHHHHHHHHHHHH
ALSLEANRAEWIYSNFITEDTASLSAAVNEKVTATSVRLATEAAKFAEVELDAVNARKLN
HEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHH
MLRSALVLPSPLDPAKNAELAGIVAQLNGLYGKGKYCFADGRCLTQPELSALMAESRDPE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCCHHHHHHHHCCCCHH
LLKEIWAGWRDIAKPMRPLFEREVVLANEGAKDLGFANLSELWRSQYDMAPDAFSTELDR
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
LWGQVKPLYDSLHCYVRGELNAQYGDDVVPRTGPIPAHLLGNMWAQQWGTIYPLVAPKDA
HHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
DPGYDVTALLAKQGYDEHKMVQQAESFFTSLGFDKLPDTFWSRSLFVQPKDRDVVCHASA
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCHHHHCCEEEECCCCCCEEEEECC
WDLDNADDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKNQPFIFKNSANDGFHEAIGDT
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCCHHHHCCCE
VALSITPKYLQQIGLLDTVPDASKDIGLLLKQALDKVAFLPFGLMIDQWRWKVFSGEITP
EEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
ANYNQAWWDLRLKYQGVMAPVARSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHRSLC
CCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
DVAGDQGPVHRCSIYGNQEAGAKLNQMLEMGSSKPWPEALAVVTGKQEMDASAVLDYFAP
HHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHEEEECCHHCCHHHHHHHHHH
LKTWLDEQNTHANRQCGW
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLRPAKLALGVALALGLSACQDEQHSVAVNKDVAAVTAVSSNVSTQDAIDFINQAEAELA
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHEEEECCCCCCHHHHHHHHHHHHHHHH
ALSLEANRAEWIYSNFITEDTASLSAAVNEKVTATSVRLATEAAKFAEVELDAVNARKLN
HEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHH
MLRSALVLPSPLDPAKNAELAGIVAQLNGLYGKGKYCFADGRCLTQPELSALMAESRDPE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCCHHHHHHHHCCCCHH
LLKEIWAGWRDIAKPMRPLFEREVVLANEGAKDLGFANLSELWRSQYDMAPDAFSTELDR
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
LWGQVKPLYDSLHCYVRGELNAQYGDDVVPRTGPIPAHLLGNMWAQQWGTIYPLVAPKDA
HHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
DPGYDVTALLAKQGYDEHKMVQQAESFFTSLGFDKLPDTFWSRSLFVQPKDRDVVCHASA
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCHHHHCCEEEECCCCCCEEEEECC
WDLDNADDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKNQPFIFKNSANDGFHEAIGDT
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECCCCCCHHHHCCCE
VALSITPKYLQQIGLLDTVPDASKDIGLLLKQALDKVAFLPFGLMIDQWRWKVFSGEITP
EEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
ANYNQAWWDLRLKYQGVMAPVARSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHRSLC
CCCCCCEEEEEEEECCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
DVAGDQGPVHRCSIYGNQEAGAKLNQMLEMGSSKPWPEALAVVTGKQEMDASAVLDYFAP
HHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHEEEECCHHCCHHHHHHHHHH
LKTWLDEQNTHANRQCGW
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA