| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is zwf [H]
Identifier: 119774947
GI number: 119774947
Start: 2205565
End: 2207037
Strand: Reverse
Name: zwf [H]
Synonym: Sama_1812
Alternate gene names: 119774947
Gene position: 2207037-2205565 (Counterclockwise)
Preceding gene: 119774950
Following gene: 119774946
Centisome position: 51.25
GC content: 49.97
Gene sequence:
>1473_bases ATGGGCAATACAACATCAGGGGCAAAAGCTTGTGATTTTGTCCTTTTCGGTACCAAAGGTGACCTGGCGAGGCGCAAACT GCTTCCCTCTTTATACCAATTGGATAAGGCAACACTGCTTCACAACGACACCAAGATCATCGGTGTTGCCAAAGATGCAT TCTCTACTGAAGAATTTCGTGAGCTGGTTAAGACGGCACTGACCACCTTCGTTAAAGATCCCCTCTGCGAAACCACTATC GAAAGATTCGTCAGCCGCTGCCATTATGTCGGTACCAATTTCACCGAGTCAGAAGGGTACAGTGCATTCCATGAGCTGCT TGAACCTGAAAAGCGGGTCATGGTTAATTACTTTGCTACTCCTCCTGCCATTTTCGGCGATATCTGCCGCTGTCTGCACG AACAAAATCTGATTTTCCCCGATACCCGCGTTGTCCTAGAAAAGCCAATTGGCTCAGATCTCGAATCTTCCCGAGTTATC AATAACCAGGTATCTCAATACTTCAATGAGAACCAGGTTTATCGCATCGACCATTACCTGGGTAAAGAAACGGTACAAAA CCTGATTGCACTGCGTTTTGCCAACTCACTCTTTGCGTCCAAATGGGATAACCGCACTATCGATCATGTGCAGATTACCG TTGCAGAAGAAGTGGGTATTGAAGGTCGTTGGGGTTATTTCGATAAAGCCGGCCAGATGCGGGACATGATCCAAAACCAC CTGTTACAGGTGCTAACACTGGTCGCCATGGATCCACCCGTAAACCTGGATGCCGACTCTATCCGTGATGAAAAGGTAAA GGTGCTTAAGTCGCTGCGCCCAATCAACATGGATAACGTCAACGAAAACACGGTACGTGGCCAATACTCTGCGGGTTTCC TGAAGGGCAGCCCGGTTCCAGGCTATCTCGAGGAAGAAGGCGCAAACGTTAATTCCAATACCGAGACCTTTGTGGCACTG CGTGTGGATATTGACAACTGGCGCTGGGCCGGTGTGCCATTTTATCTGCGCAGTGGCAAACGTATGCCGTTCAAAAGTTC AGAAATTGTGGTGCATTTTAAAAATCCACCGCACAACCTGTATCGCTCCAGTTACCGTAATCTGCCACCGAACAAATTGA CCATTCGTCTGCAACCCCATGAAGGTGTTGAAATTCAGATGATGAACAAGGTGCCGGGTCTGGAGCAAAAGACGCGTCTG CAAACCACCAAGTTAGATCTCAGCTTCTCTGACACCTTTAAAAACGAGCGCATTGCCGATGCGTACGAACGTCTGCTGCT GGAAGCCATGCTCGGTAACCAGGCGCTGTTCGTTCGCCGCGACGAAGTAGAGCAGGCCTGGACCTGGGTTGATGGCATCA TTCAGGCGTGGGAAGCGGGTAACGAAAGACCGAAAGCCTATCCTGCGGGCACCTGGGGGCCGGTGGCCTCGGTAGCGCTC ATCACCAAAGATGGGCGTTCCTGGGATGAATAA
Upstream 100 bases:
>100_bases ATATGGATGCATAAATCAGATTCTGTTGTTATATTACAACAAAAGGGCTTCTGGCCGTCCAGCATACGGCGAAGCCGATT ACAAAGGAGAGCTTGCAGCA
Downstream 100 bases:
>100_bases GGAGGCCAAGGTGCTGAAAGAAGCGGTATTCAAATCATTCGATAACACTGATTCGCTGGAAACCCAGTTGGCAGACCGTA TCGCGCGCCAACTGCAGGAT
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MGNTTSGAKACDFVLFGTKGDLARRKLLPSLYQLDKATLLHNDTKIIGVAKDAFSTEEFRELVKTALTTFVKDPLCETTI ERFVSRCHYVGTNFTESEGYSAFHELLEPEKRVMVNYFATPPAIFGDICRCLHEQNLIFPDTRVVLEKPIGSDLESSRVI NNQVSQYFNENQVYRIDHYLGKETVQNLIALRFANSLFASKWDNRTIDHVQITVAEEVGIEGRWGYFDKAGQMRDMIQNH LLQVLTLVAMDPPVNLDADSIRDEKVKVLKSLRPINMDNVNENTVRGQYSAGFLKGSPVPGYLEEEGANVNSNTETFVAL RVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVHFKNPPHNLYRSSYRNLPPNKLTIRLQPHEGVEIQMMNKVPGLEQKTRL QTTKLDLSFSDTFKNERIADAYERLLLEAMLGNQALFVRRDEVEQAWTWVDGIIQAWEAGNERPKAYPAGTWGPVASVAL ITKDGRSWDE
Sequences:
>Translated_490_residues MGNTTSGAKACDFVLFGTKGDLARRKLLPSLYQLDKATLLHNDTKIIGVAKDAFSTEEFRELVKTALTTFVKDPLCETTI ERFVSRCHYVGTNFTESEGYSAFHELLEPEKRVMVNYFATPPAIFGDICRCLHEQNLIFPDTRVVLEKPIGSDLESSRVI NNQVSQYFNENQVYRIDHYLGKETVQNLIALRFANSLFASKWDNRTIDHVQITVAEEVGIEGRWGYFDKAGQMRDMIQNH LLQVLTLVAMDPPVNLDADSIRDEKVKVLKSLRPINMDNVNENTVRGQYSAGFLKGSPVPGYLEEEGANVNSNTETFVAL RVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVHFKNPPHNLYRSSYRNLPPNKLTIRLQPHEGVEIQMMNKVPGLEQKTRL QTTKLDLSFSDTFKNERIADAYERLLLEAMLGNQALFVRRDEVEQAWTWVDGIIQAWEAGNERPKAYPAGTWGPVASVAL ITKDGRSWDE >Mature_489_residues GNTTSGAKACDFVLFGTKGDLARRKLLPSLYQLDKATLLHNDTKIIGVAKDAFSTEEFRELVKTALTTFVKDPLCETTIE RFVSRCHYVGTNFTESEGYSAFHELLEPEKRVMVNYFATPPAIFGDICRCLHEQNLIFPDTRVVLEKPIGSDLESSRVIN NQVSQYFNENQVYRIDHYLGKETVQNLIALRFANSLFASKWDNRTIDHVQITVAEEVGIEGRWGYFDKAGQMRDMIQNHL LQVLTLVAMDPPVNLDADSIRDEKVKVLKSLRPINMDNVNENTVRGQYSAGFLKGSPVPGYLEEEGANVNSNTETFVALR VDIDNWRWAGVPFYLRSGKRMPFKSSEIVVHFKNPPHNLYRSSYRNLPPNKLTIRLQPHEGVEIQMMNKVPGLEQKTRLQ TTKLDLSFSDTFKNERIADAYERLLLEAMLGNQALFVRRDEVEQAWTWVDGIIQAWEAGNERPKAYPAGTWGPVASVALI TKDGRSWDE
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=483, Percent_Identity=36.231884057971, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI109389365, Length=483, Percent_Identity=36.231884057971, Blast_Score=313, Evalue=2e-85, Organism=Homo sapiens, GI52145310, Length=500, Percent_Identity=28.2, Blast_Score=162, Evalue=6e-40, Organism=Escherichia coli, GI1788158, Length=486, Percent_Identity=64.6090534979424, Blast_Score=664, Evalue=0.0, Organism=Caenorhabditis elegans, GI17538218, Length=484, Percent_Identity=38.0165289256198, Blast_Score=328, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6324088, Length=475, Percent_Identity=36.8421052631579, Blast_Score=306, Evalue=6e-84, Organism=Drosophila melanogaster, GI24643350, Length=481, Percent_Identity=36.7983367983368, Blast_Score=311, Evalue=7e-85, Organism=Drosophila melanogaster, GI24643352, Length=481, Percent_Identity=36.7983367983368, Blast_Score=311, Evalue=9e-85, Organism=Drosophila melanogaster, GI221513548, Length=484, Percent_Identity=28.3057851239669, Blast_Score=192, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 55777; Mature: 55646
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNTTSGAKACDFVLFGTKGDLARRKLLPSLYQLDKATLLHNDTKIIGVAKDAFSTEEFR CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHCCHHHHH ELVKTALTTFVKDPLCETTIERFVSRCHYVGTNFTESEGYSAFHELLEPEKRVMVNYFAT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHEEEEEECC PPAIFGDICRCLHEQNLIFPDTRVVLEKPIGSDLESSRVINNQVSQYFNENQVYRIDHYL CHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHH GKETVQNLIALRFANSLFASKWDNRTIDHVQITVAEEVGIEGRWGYFDKAGQMRDMIQNH CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHH LLQVLTLVAMDPPVNLDADSIRDEKVKVLKSLRPINMDNVNENTVRGQYSAGFLKGSPVP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GYLEEEGANVNSNTETFVALRVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVHFKNPPHNL CCHHHCCCCCCCCCEEEEEEEEECCCCEECCCCCEECCCCCCCCCCCCEEEEECCCCHHH YRSSYRNLPPNKLTIRLQPHEGVEIQMMNKVPGLEQKTRLQTTKLDLSFSDTFKNERIAD HHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHCEEEEEEEEEHHHHCCCHHHH AYERLLLEAMLGNQALFVRRDEVEQAWTWVDGIIQAWEAGNERPKAYPAGTWGPVASVAL HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEE ITKDGRSWDE EEECCCCCCC >Mature Secondary Structure GNTTSGAKACDFVLFGTKGDLARRKLLPSLYQLDKATLLHNDTKIIGVAKDAFSTEEFR CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHCCHHHHH ELVKTALTTFVKDPLCETTIERFVSRCHYVGTNFTESEGYSAFHELLEPEKRVMVNYFAT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHEEEEEECC PPAIFGDICRCLHEQNLIFPDTRVVLEKPIGSDLESSRVINNQVSQYFNENQVYRIDHYL CHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHH GKETVQNLIALRFANSLFASKWDNRTIDHVQITVAEEVGIEGRWGYFDKAGQMRDMIQNH CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHH LLQVLTLVAMDPPVNLDADSIRDEKVKVLKSLRPINMDNVNENTVRGQYSAGFLKGSPVP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GYLEEEGANVNSNTETFVALRVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVHFKNPPHNL CCHHHCCCCCCCCCEEEEEEEEECCCCEECCCCCEECCCCCCCCCCCCEEEEECCCCHHH YRSSYRNLPPNKLTIRLQPHEGVEIQMMNKVPGLEQKTRLQTTKLDLSFSDTFKNERIAD HHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHCEEEEEEEEEHHHHCCCHHHH AYERLLLEAMLGNQALFVRRDEVEQAWTWVDGIIQAWEAGNERPKAYPAGTWGPVASVAL HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEE ITKDGRSWDE EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]