Click here to switch to the map view.

The map label for this gene is 119774933

Identifier: 119774933

GI number: 119774933

Start: 2190329

End: 2191021

Strand: Direct

Name: 119774933

Synonym: Sama_1798

Alternate gene names: NA

Gene position: 2190329-2191021 (Clockwise)

Preceding gene: 119774932

Following gene: 119774934

Centisome position: 50.87

GC content: 56.42

Gene sequence:

>693_bases
ATGGACTACAGCCTTTCAGGCGCCTTTTTGGTCGGATTGATGGGCGGAGTTCACTGCTTTGGCATGTGTGGCGGCCTGTT
GGGTGCCTTTTCCAGCCAAATCCCAGCGCCGCCCCGTCATGAAAACCCCCTCGCCCATCGGCTCGGCTTCCTTTTGTCTT
ACAATAGCGGCCGTATCGCCAGCTACACTCTCGCTGGCGCCATCGCCGGTGGTGCCTCAGGCGGCTTAAGCCTGCTGTTT
GATGCGGGCCATCTTACGCTGTTTCTGCGTTTTCTGGCCGGACTCATGATGATTCTTCTGGGGTTATACGTTGCCAAAAT
CTGGTCTGGTGTTGTGTTCATCGAAACGCTCGGCAAAGGACTGTGGCGTGTAATTCAGCCTTTTGGAAAACGCCTTCTGC
CCATAGACACCCGCGCCAAAGCCGTTCTTGCTGGCAGCGTATGGGGCTGGTTGCCCTGCGGTTTGGTGTATTCCACCCTG
ACCTGGTCTGTCGCCAGTGCCAATCCACTGGATGGTGCCCTTATCATGCTGTTTTTCGGTCTGGGCACCTTGCCTGCACT
CCTGAGTGTGGGCGTGGCGGCAAAGTCGCTGATGGGGTGGTTACAACGCCGTGCTGTTCGCTGGTTATCGGGTGCACTGC
TCATAGCCTTTGGGATTCAAACCTTATATATTGGTGTCGCCCAGCTTGGCTAG

Upstream 100 bases:

>100_bases
TAGACCGCCAGGGCGCGTCAATCCTGTTTGAAGAAGAAACCCCTAAAGCGCCACTCTCTGGCAAGTCTTCTTCAAACAAC
AATGAAGCGGACAAGCGCTG

Downstream 100 bases:

>100_bases
CCCGGCAGGTGCAATTGAGTTAACATGTAGTTAATCAACAGGTTTGGGAACGAATAATGCCAATCGAACAAAACAAACAT
CGCCGCCCCGCCGCCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDYSLSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIASYTLAGAIAGGASGGLSLLF
DAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKGLWRVIQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTL
TWSVASANPLDGALIMLFFGLGTLPALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTLYIGVAQLG

Sequences:

>Translated_230_residues
MDYSLSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIASYTLAGAIAGGASGGLSLLF
DAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKGLWRVIQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTL
TWSVASANPLDGALIMLFFGLGTLPALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTLYIGVAQLG
>Mature_230_residues
MDYSLSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIASYTLAGAIAGGASGGLSLLF
DAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKGLWRVIQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTL
TWSVASANPLDGALIMLFFGLGTLPALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTLYIGVAQLG

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24239; Mature: 24239

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYSLSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEE
SYTLAGAIAGGASGGLSLLFDAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKG
HHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LWRVIQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTLTWSVASANPLDGALIMLFFG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LGTLPALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTLYIGVAQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYSLSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEE
SYTLAGAIAGGASGGLSLLFDAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKG
HHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LWRVIQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTLTWSVASANPLDGALIMLFFG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LGTLPALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTLYIGVAQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA