| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774914
Identifier: 119774914
GI number: 119774914
Start: 2172978
End: 2173271
Strand: Reverse
Name: 119774914
Synonym: Sama_1779
Alternate gene names: NA
Gene position: 2173271-2172978 (Counterclockwise)
Preceding gene: 119774915
Following gene: 119774913
Centisome position: 50.47
GC content: 49.66
Gene sequence:
>294_bases ATGATTTTGCATCATATTCAAAGCTCATCTGCGCAAAGCGCCGGTCTTCGCCTCGCCCTTCGCTATGCGGGTAAGCAGGA TGCGCTGATAATCAGTGGCAATGCCACAGGCTCCCTGCTTCATGCCAGTTGGCAGGCAAAACTTGCCGGCAAAACTGTGT ATTTTTTAGATGAAGATGTCCATGCCCGGGGGCTGACAGCCATGATTACAGCACGTTACCCTGATGCGAAGTTGGTTGAT TACCACGACTGGGTAAAACTCTCTTTAACGTTTGACAAGGTGATTACGTGGTAG
Upstream 100 bases:
>100_bases TCGCGATAGCGCCAAGCGCTCTGCCCCTGGATGTTCAAGTGCTGACAAACAGTGATATCCGTGAACATTTCGGCTCGGTC GATGAAGTGGTGGTGTACTG
Downstream 100 bases:
>100_bases ATTCGATTTTGTTTAAGGGCCAGCAGATTGAAGTCGATAAAAATGGCTATCTGCTGTCGGTTAACGACTGGAGCCCCGAA CTCGCGCTTGTGCTGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: DsrH Like Protein; Protein Involved In Oxidation Of Intracellular Sulfur; Sulfur Relay Protein TusB/DsrH
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MILHHIQSSSAQSAGLRLALRYAGKQDALIISGNATGSLLHASWQAKLAGKTVYFLDEDVHARGLTAMITARYPDAKLVD YHDWVKLSLTFDKVITW
Sequences:
>Translated_97_residues MILHHIQSSSAQSAGLRLALRYAGKQDALIISGNATGSLLHASWQAKLAGKTVYFLDEDVHARGLTAMITARYPDAKLVD YHDWVKLSLTFDKVITW >Mature_97_residues MILHHIQSSSAQSAGLRLALRYAGKQDALIISGNATGSLLHASWQAKLAGKTVYFLDEDVHARGLTAMITARYPDAKLVD YHDWVKLSLTFDKVITW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10739; Mature: 10739
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILHHIQSSSAQSAGLRLALRYAGKQDALIISGNATGSLLHASWQAKLAGKTVYFLDEDV CEEECCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEEEEEEEECCCEEEEECCCC HARGLTAMITARYPDAKLVDYHDWVKLSLTFDKVITW CCCCEEEEEEEECCCCEEEECCCEEEEEEEEHEEECC >Mature Secondary Structure MILHHIQSSSAQSAGLRLALRYAGKQDALIISGNATGSLLHASWQAKLAGKTVYFLDEDV CEEECCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEEEEEEEECCCEEEEECCCC HARGLTAMITARYPDAKLVDYHDWVKLSLTFDKVITW CCCCEEEEEEEECCCCEEEECCCEEEEEEEEHEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA