| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is tusC [H]
Identifier: 119774915
GI number: 119774915
Start: 2173271
End: 2173627
Strand: Reverse
Name: tusC [H]
Synonym: Sama_1780
Alternate gene names: 119774915
Gene position: 2173627-2173271 (Counterclockwise)
Preceding gene: 119774916
Following gene: 119774914
Centisome position: 50.48
GC content: 50.14
Gene sequence:
>357_bases GTGAAAAAACTCTGTGTTGTGTTTTCAACGTCGCCCCACAGCAATGCTGCTGGCCGGGAGGCACTGGATTTTGCCATGCT GGCAGCTAGTTATGATTTAGAAACCAGTTTACTGTTCACCGATGAAGGCGTACTGCACCTGATCTCTAATCAAGAGCCGG AATCCATCGGTTGCCGCGACTACATAGCCACCTTTGGTGCGCTGGAGTTTTACGATATCGAAAACCTTTACGTGTGTGAG GAAAGCCTGAAGGAATTCGCGATAGCGCCAAGCGCTCTGCCCCTGGATGTTCAAGTGCTGACAAACAGTGATATCCGTGA ACATTTCGGCTCGGTCGATGAAGTGGTGGTGTACTGA
Upstream 100 bases:
>100_bases TCATTGGAATGTGGATGAACATTTCACTAACGGCGGCCTGGGCGAGTTGGTAAGTGGCATCGCCAAAGCCGACCGGCTCA TCTGTTTCTAAGGAGTGACA
Downstream 100 bases:
>100_bases TGATTTTGCATCATATTCAAAGCTCATCTGCGCAAAGCGCCGGTCTTCGCCTCGCCCTTCGCTATGCGGGTAAGCAGGAT GCGCTGATAATCAGTGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKKLCVVFSTSPHSNAAGREALDFAMLAASYDLETSLLFTDEGVLHLISNQEPESIGCRDYIATFGALEFYDIENLYVCE ESLKEFAIAPSALPLDVQVLTNSDIREHFGSVDEVVVY
Sequences:
>Translated_118_residues MKKLCVVFSTSPHSNAAGREALDFAMLAASYDLETSLLFTDEGVLHLISNQEPESIGCRDYIATFGALEFYDIENLYVCE ESLKEFAIAPSALPLDVQVLTNSDIREHFGSVDEVVVY >Mature_118_residues MKKLCVVFSTSPHSNAAGREALDFAMLAASYDLETSLLFTDEGVLHLISNQEPESIGCRDYIATFGALEFYDIENLYVCE ESLKEFAIAPSALPLDVQVLTNSDIREHFGSVDEVVVY
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG2923
COG function: function code P; Uncharacterized protein involved in the oxidation of intracellular sulfur
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrF/tusC family [H]
Homologues:
Organism=Escherichia coli, GI1789742, Length=108, Percent_Identity=39.8148148148148, Blast_Score=88, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017462 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 13057; Mature: 13057
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLCVVFSTSPHSNAAGREALDFAMLAASYDLETSLLFTDEGVLHLISNQEPESIGCRD CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCHHH YIATFGALEFYDIENLYVCEESLKEFAIAPSALPLDVQVLTNSDIREHFGSVDEVVVY HHHHHCCEEEEECCCEEEHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCCEEEEC >Mature Secondary Structure MKKLCVVFSTSPHSNAAGREALDFAMLAASYDLETSLLFTDEGVLHLISNQEPESIGCRD CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCHHH YIATFGALEFYDIENLYVCEESLKEFAIAPSALPLDVQVLTNSDIREHFGSVDEVVVY HHHHHCCEEEEECCCEEEHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA