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The map label for this gene is mmgC [H]

Identifier: 119774878

GI number: 119774878

Start: 2132170

End: 2133906

Strand: Direct

Name: mmgC [H]

Synonym: Sama_1743

Alternate gene names: 119774878

Gene position: 2132170-2133906 (Clockwise)

Preceding gene: 119774877

Following gene: 119774881

Centisome position: 49.51

GC content: 53.89

Gene sequence:

>1737_bases
ATGAATCCCTACCAAGCGCCACTCGGCGAGATGCGTTTTTTGCTGGAACATGTATTTAATGCCCAAGCGACCTGGCAAGG
TCTTGCGTCCCTCGACGGCATGGTTGATATGGATACCGCACTGGCGATTTTAGAAGAAGCCGCCAAACTGAACAGCGAAT
TGGTTCATCCTATCAACCGTGCTGGTGATGAAGAGGGCGTTGGCTTCAGTGACGGTAGGGTAACCACGCCCAAGGGTTAC
AAAGAGGCCTATAACGCCTTTGTTGAAGGCGGCTGGGTTGGCCTTAGCGGTGACCCGGAATATGGCGGCATGGGGATGCC
CAAGATGCTCGGCGTGCTGGTCGACGAAATGGGCTACAGCGCCTGTAACGCATTTAATCTCTATGGCTCACTGACTGCAG
GGGCGGCGCTGGCCATTAATGCTCATGGTACAGAAGAGCTTAAGAGCACCTATTTGCCCAAGCTCTACAGTGGTGAATGG
GCTGGTGCTATGGATATGACAGAGCCACAGGCGGGTTCCGATCTTCGTCATATCCGCACTCGCGCAGAGCCCCAGGAAGA
CGGCAGTTATCTGATAACAGGCAGTAAAATCTTTATTACCGGTGGCGATCAGGACTTGACTGAAAACGTTATCCACTTGG
TGCTGGCAAAGATTAGCGGCTCCAACACTCTGTCGCTGTTTTTGGTTCCCAAAATCGGCGTCGATGACCAGGGGAATCTG
ACGGAGCCCAACGGTGTTTCTGTGGGCAGCATAGAGCACAAGATGGGGCTTAAGGGCTCGGCGACCTGCGTTATGAACTT
CGACAGTGCCCGTGGTTGGCTTATTGGCCGCGAAAACAAAGGGCTCGCCTGTATGTTCACCATGATGAACTATGAGCGCC
TTGCCATCGGTATTCAGGGGCTTGGCAGTGCACAGGCTGCGGTGCAAATGGCATCTGACTATGCCAGGGAGCGTTTGCAG
GGGAATGCCGTTGGCAGCACGGCAGCGGCCGATCCCATTTTGGTCCATGGCGATGTTCGCCGTATGCTGCTCACCACCCG
GACACTTACCGATGCCGGCCGGGCACTCGCCGTACACACAGGCAAGCAATTGGATTTGGCCAAGTTCGCCGATGATGACG
CCGTTAAAACCAAGGCGGGGCGTTATGTGGGACTTTTGACCCCGGTGGCAAAGGCCTTTTTAACTGACCGAGGCCTGGAT
ATCACCATCATGGCGCAGCAGGTATTTGGTGGCCATGGTTATATCCGTGAAACCGGGATTGAGCAGCTGGTGCGTGACAC
CCGTATTGCCCAGATTTACGAGGGTACCAACGGCATTCAGGCCATCGACTTTTTGGGCCGTAAAGTCACAGGCGATAATC
TGGCGACGGTTAAGGAGTTTATCGCCGAGCATATTGAGGTGCTCAGTGATACCTGTGACAAGGCCAATTCACTCAGAGTG
GGTTTCGCAGATTTCGTCGCTGTAGCGACCTGGATTAACGATAATAAGTTAAGCCGTCCTGCGTTGATCAATTCGGTGGC
AGTAGAGATGCTGGATGCTTTTGGTTATCTGCTCTATGGCTATTATCACTTGCTGATGCGTGATGCGGCCCGCGCCGCCG
ACAGTGAGTTTGCTGCCGCAAAAGCGGCTTACTGTGACTATTACTTTGCCAAGCTGATGCCTCGAGCAGACGCACTGCTG
CGGGCCGCAAAAGCCGGTGATGAGCTTTTGATGTCACTGCCTGAAACCTGTTTCTAA

Upstream 100 bases:

>100_bases
CGGGGCTTTTTTATGGCTATGCTTGTGGAATGGATTGAGTTTCCCGCCTTTATTCGATAGATTGAAACAACTGTTTAAAT
TCACCGTTTGAGAAAAGCCA

Downstream 100 bases:

>100_bases
GCCGTTTCCGATCAGGATTAGATGACAGCGATATAAAAAAGGGCCGCCAGAAGGCCCTTTTTACTTTGTCTTTGTCATTG
ATTAAACGGGCTATTGAGCT

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MNPYQAPLGEMRFLLEHVFNAQATWQGLASLDGMVDMDTALAILEEAAKLNSELVHPINRAGDEEGVGFSDGRVTTPKGY
KEAYNAFVEGGWVGLSGDPEYGGMGMPKMLGVLVDEMGYSACNAFNLYGSLTAGAALAINAHGTEELKSTYLPKLYSGEW
AGAMDMTEPQAGSDLRHIRTRAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDDQGNL
TEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAIGIQGLGSAQAAVQMASDYARERLQ
GNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRALAVHTGKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLD
ITIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATVKEFIAEHIEVLSDTCDKANSLRV
GFADFVAVATWINDNKLSRPALINSVAVEMLDAFGYLLYGYYHLLMRDAARAADSEFAAAKAAYCDYYFAKLMPRADALL
RAAKAGDELLMSLPETCF

Sequences:

>Translated_578_residues
MNPYQAPLGEMRFLLEHVFNAQATWQGLASLDGMVDMDTALAILEEAAKLNSELVHPINRAGDEEGVGFSDGRVTTPKGY
KEAYNAFVEGGWVGLSGDPEYGGMGMPKMLGVLVDEMGYSACNAFNLYGSLTAGAALAINAHGTEELKSTYLPKLYSGEW
AGAMDMTEPQAGSDLRHIRTRAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDDQGNL
TEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAIGIQGLGSAQAAVQMASDYARERLQ
GNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRALAVHTGKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLD
ITIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATVKEFIAEHIEVLSDTCDKANSLRV
GFADFVAVATWINDNKLSRPALINSVAVEMLDAFGYLLYGYYHLLMRDAARAADSEFAAAKAAYCDYYFAKLMPRADALL
RAAKAGDELLMSLPETCF
>Mature_578_residues
MNPYQAPLGEMRFLLEHVFNAQATWQGLASLDGMVDMDTALAILEEAAKLNSELVHPINRAGDEEGVGFSDGRVTTPKGY
KEAYNAFVEGGWVGLSGDPEYGGMGMPKMLGVLVDEMGYSACNAFNLYGSLTAGAALAINAHGTEELKSTYLPKLYSGEW
AGAMDMTEPQAGSDLRHIRTRAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDDQGNL
TEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAIGIQGLGSAQAAVQMASDYARERLQ
GNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRALAVHTGKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLD
ITIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATVKEFIAEHIEVLSDTCDKANSLRV
GFADFVAVATWINDNKLSRPALINSVAVEMLDAFGYLLYGYYHLLMRDAARAADSEFAAAKAAYCDYYFAKLMPRADALL
RAAKAGDELLMSLPETCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=384, Percent_Identity=28.3854166666667, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI21361497, Length=369, Percent_Identity=29.810298102981, Blast_Score=115, Evalue=2e-25,
Organism=Homo sapiens, GI4501859, Length=411, Percent_Identity=26.0340632603406, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI226958412, Length=388, Percent_Identity=29.1237113402062, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI226958414, Length=370, Percent_Identity=29.7297297297297, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI4557235, Length=421, Percent_Identity=28.2660332541568, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI76496475, Length=421, Percent_Identity=28.2660332541568, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI7656849, Length=355, Percent_Identity=27.0422535211268, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI4557233, Length=367, Percent_Identity=26.158038147139, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI187960098, Length=352, Percent_Identity=25.5681818181818, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4557231, Length=352, Percent_Identity=25.5681818181818, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4503943, Length=323, Percent_Identity=28.1733746130031, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI7669494, Length=306, Percent_Identity=27.4509803921569, Blast_Score=66, Evalue=1e-10,
Organism=Escherichia coli, GI87082384, Length=282, Percent_Identity=30.4964539007092, Blast_Score=120, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=413, Percent_Identity=29.2978208232446, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI71985184, Length=367, Percent_Identity=27.2479564032698, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=350, Percent_Identity=27.7142857142857, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=361, Percent_Identity=27.9778393351801, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=320, Percent_Identity=28.125, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=320, Percent_Identity=28.125, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=361, Percent_Identity=27.7008310249307, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=355, Percent_Identity=28.169014084507, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=399, Percent_Identity=25.31328320802, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=346, Percent_Identity=27.1676300578035, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17570075, Length=367, Percent_Identity=25.8855585831063, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=416, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=246, Percent_Identity=28.8617886178862, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=28.0851063829787, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=321, Percent_Identity=24.6105919003115, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355753, Length=366, Percent_Identity=29.5081967213115, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI281363737, Length=370, Percent_Identity=27.027027027027, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24666513, Length=408, Percent_Identity=27.4509803921569, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24646207, Length=360, Percent_Identity=25.8333333333333, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24660351, Length=311, Percent_Identity=30.5466237942122, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356377, Length=330, Percent_Identity=25.1515151515152, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19920834, Length=335, Percent_Identity=28.0597014925373, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 62275; Mature: 62275

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYQAPLGEMRFLLEHVFNAQATWQGLASLDGMVDMDTALAILEEAAKLNSELVHPINR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGDEEGVGFSDGRVTTPKGYKEAYNAFVEGGWVGLSGDPEYGGMGMPKMLGVLVDEMGYS
CCCCCCCCCCCCEEECCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCH
ACNAFNLYGSLTAGAALAINAHGTEELKSTYLPKLYSGEWAGAMDMTEPQAGSDLRHIRT
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDDQGNL
CCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCC
TEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAIGIQG
CCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEHHCCCEEEEECCC
LGSAQAAVQMASDYARERLQGNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRALAVHT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEC
GKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLDITIMAQQVFGGHGYIRETGI
CCCCCHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHH
EQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATVKEFIAEHIEVLSDTCDKANSLRV
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
GFADFVAVATWINDNKLSRPALINSVAVEMLDAFGYLLYGYYHLLMRDAARAADSEFAAA
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KAAYCDYYFAKLMPRADALLRAAKAGDELLMSLPETCF
HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCC
>Mature Secondary Structure
MNPYQAPLGEMRFLLEHVFNAQATWQGLASLDGMVDMDTALAILEEAAKLNSELVHPINR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGDEEGVGFSDGRVTTPKGYKEAYNAFVEGGWVGLSGDPEYGGMGMPKMLGVLVDEMGYS
CCCCCCCCCCCCEEECCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCH
ACNAFNLYGSLTAGAALAINAHGTEELKSTYLPKLYSGEWAGAMDMTEPQAGSDLRHIRT
HHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
RAEPQEDGSYLITGSKIFITGGDQDLTENVIHLVLAKISGSNTLSLFLVPKIGVDDQGNL
CCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCC
TEPNGVSVGSIEHKMGLKGSATCVMNFDSARGWLIGRENKGLACMFTMMNYERLAIGIQG
CCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEHHCCCEEEEECCC
LGSAQAAVQMASDYARERLQGNAVGSTAAADPILVHGDVRRMLLTTRTLTDAGRALAVHT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEC
GKQLDLAKFADDDAVKTKAGRYVGLLTPVAKAFLTDRGLDITIMAQQVFGGHGYIRETGI
CCCCCHHHHCCCCHHHHHCCCEEEHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHHHHHH
EQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNLATVKEFIAEHIEVLSDTCDKANSLRV
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE
GFADFVAVATWINDNKLSRPALINSVAVEMLDAFGYLLYGYYHLLMRDAARAADSEFAAA
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KAAYCDYYFAKLMPRADALLRAAKAGDELLMSLPETCF
HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]