Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yaiL [H]

Identifier: 119774877

GI number: 119774877

Start: 2131491

End: 2132036

Strand: Direct

Name: yaiL [H]

Synonym: Sama_1742

Alternate gene names: 119774877

Gene position: 2131491-2132036 (Clockwise)

Preceding gene: 119774876

Following gene: 119774878

Centisome position: 49.5

GC content: 50.73

Gene sequence:

>546_bases
ATGGCTAACGCATTACAGGAGCAACTGCTTAAAGCGGGGCTGACCAGCAAGCAAAAGATAAAAGATGTTAAAACCAAAAA
ACGCCGTGACCGAAAAAGCAATGTAGACGATGGTTCAGCGGCGCTTAAACAGAGCATTGCTGAGCAAAAGGCGTCTCAGG
CTGCCCAGGATAAGGCTCTTAACGAAAAGCGTTTTCAGGAAGCCGAAGCCAAGGGACAGGTGCGCAGCCTGATCACTGAG
CTCAAGCGCCTTGCCATTAGTTTGCCAGAACATGCGGACGTGAAATTCAACTACACCATAGGCAGTAAAATCTACAGCGT
GTACATCAACGAGAAGATCCAAAATCAGTTGCTCGGTGGGCACCTCGGCATTGTTCGCCACGAAGACAGCAGCTATCTGG
TGCCCCATAAACTGGCGGAACGGGTCAATTTGCTGGTACCCGAATGGTGCGGCTATCTGTGGCAGGAAAGTGATAACCAG
CCCCAAGTGGCAGAAGAGGACGATCCTTACGCCGACTATGTGATCCCCGACGATCTCATGTGGTAA

Upstream 100 bases:

>100_bases
AAGTCGGGCAAGGGCTCAGCTTAAGCCGGGCTACTCAAATAGGCCCGCATCAGGTTTAAAAAAGTACAACGGAATAGATT
CCAATTAAAGAGAGACCATC

Downstream 100 bases:

>100_bases
TCGATGTAACAAAACGAGCCCCGGTTAACAGACCGGGGCTTTTTTATGGCTATGCTTGTGGAATGGATTGAGTTTCCCGC
CTTTATTCGATAGATTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MANALQEQLLKAGLTSKQKIKDVKTKKRRDRKSNVDDGSAALKQSIAEQKASQAAQDKALNEKRFQEAEAKGQVRSLITE
LKRLAISLPEHADVKFNYTIGSKIYSVYINEKIQNQLLGGHLGIVRHEDSSYLVPHKLAERVNLLVPEWCGYLWQESDNQ
PQVAEEDDPYADYVIPDDLMW

Sequences:

>Translated_181_residues
MANALQEQLLKAGLTSKQKIKDVKTKKRRDRKSNVDDGSAALKQSIAEQKASQAAQDKALNEKRFQEAEAKGQVRSLITE
LKRLAISLPEHADVKFNYTIGSKIYSVYINEKIQNQLLGGHLGIVRHEDSSYLVPHKLAERVNLLVPEWCGYLWQESDNQ
PQVAEEDDPYADYVIPDDLMW
>Mature_180_residues
ANALQEQLLKAGLTSKQKIKDVKTKKRRDRKSNVDDGSAALKQSIAEQKASQAAQDKALNEKRFQEAEAKGQVRSLITEL
KRLAISLPEHADVKFNYTIGSKIYSVYINEKIQNQLLGGHLGIVRHEDSSYLVPHKLAERVNLLVPEWCGYLWQESDNQP
QVAEEDDPYADYVIPDDLMW

Specific function: Unknown

COG id: COG3122

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081724, Length=186, Percent_Identity=34.9462365591398, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018636 [H]

Pfam domain/function: PF09831 DUF2058 [H]

EC number: NA

Molecular weight: Translated: 20563; Mature: 20432

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANALQEQLLKAGLTSKQKIKDVKTKKRRDRKSNVDDGSAALKQSIAEQKASQAAQDKAL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NEKRFQEAEAKGQVRSLITELKRLAISLPEHADVKFNYTIGSKIYSVYINEKIQNQLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
HLGIVRHEDSSYLVPHKLAERVNLLVPEWCGYLWQESDNQPQVAEEDDPYADYVIPDDLM
CCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
W
C
>Mature Secondary Structure 
ANALQEQLLKAGLTSKQKIKDVKTKKRRDRKSNVDDGSAALKQSIAEQKASQAAQDKAL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NEKRFQEAEAKGQVRSLITELKRLAISLPEHADVKFNYTIGSKIYSVYINEKIQNQLLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
HLGIVRHEDSSYLVPHKLAERVNLLVPEWCGYLWQESDNQPQVAEEDDPYADYVIPDDLM
CCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]