| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ansA [H]
Identifier: 119774857
GI number: 119774857
Start: 2106320
End: 2107333
Strand: Reverse
Name: ansA [H]
Synonym: Sama_1722
Alternate gene names: 119774857
Gene position: 2107333-2106320 (Counterclockwise)
Preceding gene: 119774858
Following gene: 119774843
Centisome position: 48.94
GC content: 53.65
Gene sequence:
>1014_bases ATGAAAAAGCCCTCCATTTATGTCGCCTACACCGGCGGTACCATCGGTATGCAGAAAACCGCCAATGGCTTTGCGCCCGT TGCAGGATTTTTGACCCAGTGTGTCCAATCCATGCCGGAGTTCTATCACGAAGAAATGCCGGAGTTTGTGATCCACGAGT ATGACCCGCTGATTGATTCATCCAACATGTCGCCGGCACATTGGCAGATGATTGCCGATGATATTCGCAACAACTATGGC AAGTACGATGGCTTTGTCATCCTCCATGGCACAGACACCATGGCCTACACTGCGTCAGCGCTGTCCTTTATGCTGCAGGG GTTGGGTAAGCCAGTGATAGTCACCGGCTCGCAAATCCCCCTCGCCCAGCTTCGCTCAGACGGGCAAACCAACCTGCTGA ATGCCCTGTATATTGCCGCCCGTTATCCGGTTGCCGAAGTGTGTTTATTTTTCAATAACAAGCTATTTCGCGGCAATCGC ACCACCAAGGCACATGCCGATGGATTTGATGCCTTCGCCTCGCCAAACTTCCCCTTGCTGCTCGAAGCGGGGATCACCAT TAACCTGAAGGCCGGCAAAATCACCCGTGAAGCCACTGGACAGCTGGAGGTTGCCTGTATTTCACCGCAACCTGTGGGTG TGGTGACACTGTACCCGGGTATCTCTACCGATATCTTCATCAACGTCCTGCAGCAGCCGGTGAAAGCGCTGATTTTACTG ACCTTTGGCGTAGGCAACGCGCCTCAGGATCCAGCACTGCTTAACACACTCAAAGAAGCAGACGAACGGGGTGTGGTACT GGTGAACCTGACGCAGTGTTTCCAGGGGAAAGTGAATATGGGCGGCTACGCAACCGGTAACGCCCTCGCCCGCGCCGGTG TTATCAGTGGCGCCGACATGACCATCGAAGCCTGTCTCGCCAAATTGCATTTCCTGCTGTCTAAAAATCTGCCGCCGGCA GACATAAAAGCTGCCATGCAAACCAATCTGGTGGGTGAACTCACCAGCGATTAA
Upstream 100 bases:
>100_bases ACTTTATCAGTGAATTTTTAACTGAATTAGCCCCTGAGGTTTCGTTTAGGCGAAGGGATCCTTATAATTCGGTCAAAATC AAACAGCAGTCACCTCACCC
Downstream 100 bases:
>100_bases ACAAAAAAGCCGGTCTCAGACCGGCTTTTTTAGCTTTACCGCTCACTGAGCAGATCAGATTTCATCGTTACTGAAGGTCG CGATGGTTTCACCACCGAAA
Product: cytoplasmic asparaginase I
Products: NA
Alternate protein names: L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKKPSIYVAYTGGTIGMQKTANGFAPVAGFLTQCVQSMPEFYHEEMPEFVIHEYDPLIDSSNMSPAHWQMIADDIRNNYG KYDGFVILHGTDTMAYTASALSFMLQGLGKPVIVTGSQIPLAQLRSDGQTNLLNALYIAARYPVAEVCLFFNNKLFRGNR TTKAHADGFDAFASPNFPLLLEAGITINLKAGKITREATGQLEVACISPQPVGVVTLYPGISTDIFINVLQQPVKALILL TFGVGNAPQDPALLNTLKEADERGVVLVNLTQCFQGKVNMGGYATGNALARAGVISGADMTIEACLAKLHFLLSKNLPPA DIKAAMQTNLVGELTSD
Sequences:
>Translated_337_residues MKKPSIYVAYTGGTIGMQKTANGFAPVAGFLTQCVQSMPEFYHEEMPEFVIHEYDPLIDSSNMSPAHWQMIADDIRNNYG KYDGFVILHGTDTMAYTASALSFMLQGLGKPVIVTGSQIPLAQLRSDGQTNLLNALYIAARYPVAEVCLFFNNKLFRGNR TTKAHADGFDAFASPNFPLLLEAGITINLKAGKITREATGQLEVACISPQPVGVVTLYPGISTDIFINVLQQPVKALILL TFGVGNAPQDPALLNTLKEADERGVVLVNLTQCFQGKVNMGGYATGNALARAGVISGADMTIEACLAKLHFLLSKNLPPA DIKAAMQTNLVGELTSD >Mature_337_residues MKKPSIYVAYTGGTIGMQKTANGFAPVAGFLTQCVQSMPEFYHEEMPEFVIHEYDPLIDSSNMSPAHWQMIADDIRNNYG KYDGFVILHGTDTMAYTASALSFMLQGLGKPVIVTGSQIPLAQLRSDGQTNLLNALYIAARYPVAEVCLFFNNKLFRGNR TTKAHADGFDAFASPNFPLLLEAGITINLKAGKITREATGQLEVACISPQPVGVVTLYPGISTDIFINVLQQPVKALILL TFGVGNAPQDPALLNTLKEADERGVVLVNLTQCFQGKVNMGGYATGNALARAGVISGADMTIEACLAKLHFLLSKNLPPA DIKAAMQTNLVGELTSD
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=356, Percent_Identity=44.3820224719101, Blast_Score=254, Evalue=9e-68, Organism=Escherichia coli, GI1788065, Length=337, Percent_Identity=68.5459940652819, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI1789327, Length=276, Percent_Identity=27.1739130434783, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17558278, Length=357, Percent_Identity=43.6974789915966, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI193207374, Length=362, Percent_Identity=43.0939226519337, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17558280, Length=357, Percent_Identity=43.6974789915966, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI193207372, Length=362, Percent_Identity=43.0939226519337, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24639609, Length=367, Percent_Identity=43.3242506811989, Blast_Score=275, Evalue=4e-74, Organism=Drosophila melanogaster, GI24645530, Length=363, Percent_Identity=41.0468319559229, Blast_Score=250, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006033 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 36252; Mature: 36252
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPSIYVAYTGGTIGMQKTANGFAPVAGFLTQCVQSMPEFYHEEMPEFVIHEYDPLIDS CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC SNMSPAHWQMIADDIRNNYGKYDGFVILHGTDTMAYTASALSFMLQGLGKPVIVTGSQIP CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC LAQLRSDGQTNLLNALYIAARYPVAEVCLFFNNKLFRGNRTTKAHADGFDAFASPNFPLL HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHCCCCCCCEE LEAGITINLKAGKITREATGQLEVACISPQPVGVVTLYPGISTDIFINVLQQPVKALILL EECCEEEEEECCCEECCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH TFGVGNAPQDPALLNTLKEADERGVVLVNLTQCFQGKVNMGGYATGNALARAGVISGADM EECCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEECCCHHHHHCCCCCCCH TIEACLAKLHFLLSKNLPPADIKAAMQTNLVGELTSD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEECCCC >Mature Secondary Structure MKKPSIYVAYTGGTIGMQKTANGFAPVAGFLTQCVQSMPEFYHEEMPEFVIHEYDPLIDS CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC SNMSPAHWQMIADDIRNNYGKYDGFVILHGTDTMAYTASALSFMLQGLGKPVIVTGSQIP CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC LAQLRSDGQTNLLNALYIAARYPVAEVCLFFNNKLFRGNRTTKAHADGFDAFASPNFPLL HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCHHCCCCCCCEE LEAGITINLKAGKITREATGQLEVACISPQPVGVVTLYPGISTDIFINVLQQPVKALILL EECCEEEEEECCCEECCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH TFGVGNAPQDPALLNTLKEADERGVVLVNLTQCFQGKVNMGGYATGNALARAGVISGADM EECCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCEECCCHHHHHCCCCCCCH TIEACLAKLHFLLSKNLPPADIKAAMQTNLVGELTSD HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]