| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is 119774839
Identifier: 119774839
GI number: 119774839
Start: 2083061
End: 2083282
Strand: Reverse
Name: 119774839
Synonym: Sama_1703
Alternate gene names: NA
Gene position: 2083282-2083061 (Counterclockwise)
Preceding gene: 119774840
Following gene: 119774838
Centisome position: 48.38
GC content: 47.3
Gene sequence:
>222_bases ATGTTAGCCGAGTATATGCAGCAGATAGAAACCCTGGGATTAAACCTGTTTTTCGCTGCCATATTCTTCTTCATTGGCAT GGCAATCCATGACGTGCTGAAACAGGGCAACGTGCCCAAGTTTGGCCGTTATATCGTGTGGTTGGTGCTGTTTTTAGGGT GTGCAGGCTTTATCGCCAAGGGCATTATTCAAATGACTTGGGAAGGCGCCGGTATAGGCTAA
Upstream 100 bases:
>100_bases GTAAAGGCTATAGCAGACGCTAATATGATGTGATATATTCGCGCCTCTTTTTCAAGGCCGGGTTTTACCCCTACGCCAAG CAACGCCGGAGTCAGCGCTG
Downstream 100 bases:
>100_bases TGACAAAATGGCAAAAGAAGCAGCAGACAGAACAACAATCGATCTCTTTGCCGATGAAAAACGCCGTGGACGTCCCAGAA GCAATCCCCTTCCCCGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAKGIIQMTWEGAGIG
Sequences:
>Translated_73_residues MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAKGIIQMTWEGAGIG >Mature_73_residues MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAKGIIQMTWEGAGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8131; Mature: 8131
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GIIQMTWEGAGIG HHHHHHCCCCCCC >Mature Secondary Structure MLAEYMQQIETLGLNLFFAAIFFFIGMAIHDVLKQGNVPKFGRYIVWLVLFLGCAGFIAK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GIIQMTWEGAGIG HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA