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The map label for this gene is ychE [H]

Identifier: 119774830

GI number: 119774830

Start: 2073858

End: 2074490

Strand: Direct

Name: ychE [H]

Synonym: Sama_1694

Alternate gene names: 119774830

Gene position: 2073858-2074490 (Clockwise)

Preceding gene: 119774828

Following gene: 119774834

Centisome position: 48.16

GC content: 51.97

Gene sequence:

>633_bases
GTGGACGTAACGGTTTATATAAAATTTTTTCTGGGATTGGTGGCTATCATCAACCCCATAGGTCTGCTGCCGGTGTTTGT
GAGCCTCACAAGCCATCAGACTGAGGCCGAACGTAACCACACGGGTAAAATCGCCAATCTGGCGGTTGTGATAATTCTGT
TGGTGACCATAGTAGCGGGTCAGCACATCCTTAATATGTTCTCTATCTCGCTGTCGGCGTTTCGCATTGCCGGTGGCACC
CTGATTGCCATCATCGCGCTGTCGATGCTCCAGGGTAAGCTGGGTGAGGTGAAACGTAACCAGGAAGAAGACAGAGAGTC
GTCCGCGATGGAATCGGTGGCCGTGGTGCCGCTGGCGCTGCCCTTGATGGCAGGCCCTGGCGCCATCAGCTCGGTGATAG
TGTTTGCCGCAGAGCACAACAGTCTGATTGATTTGGCTGGCATGTTTGTCACCGTACTTATTTTTGGTGCGCTGAGCTTC
GGGCTGTTTCGGATGGCATCTGCCATCTACCGGGTTTTGGGTAAAACCGGCATTAACGTTATCACCCGTCTGATGGGGCT
CTTGATGCTTTCTATCGGTATTGAGGTGATGGCGGCAGGTTTCAAGGGATTGTTTCCCAACTTATTAGGTTAA

Upstream 100 bases:

>100_bases
TCTCATTTTTCGGTATTTGCGGGTTAGGGTAGAGTAATCAACTGCTTCAATATGGCGTTAATTATCAGCTTATGGCCTTA
CTGGCCGCGGAGAACCCTGG

Downstream 100 bases:

>100_bases
TAAACAACCCGATCACCAAAATAGTGGTTAGTCAGAACTCTGTAGTGAAAAGCCCCGCATCAAGTGCGGGGCTTTTTTGT
GGGTTGGGTTAAATCTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MDVTVYIKFFLGLVAIINPIGLLPVFVSLTSHQTEAERNHTGKIANLAVVIILLVTIVAGQHILNMFSISLSAFRIAGGT
LIAIIALSMLQGKLGEVKRNQEEDRESSAMESVAVVPLALPLMAGPGAISSVIVFAAEHNSLIDLAGMFVTVLIFGALSF
GLFRMASAIYRVLGKTGINVITRLMGLLMLSIGIEVMAAGFKGLFPNLLG

Sequences:

>Translated_210_residues
MDVTVYIKFFLGLVAIINPIGLLPVFVSLTSHQTEAERNHTGKIANLAVVIILLVTIVAGQHILNMFSISLSAFRIAGGT
LIAIIALSMLQGKLGEVKRNQEEDRESSAMESVAVVPLALPLMAGPGAISSVIVFAAEHNSLIDLAGMFVTVLIFGALSF
GLFRMASAIYRVLGKTGINVITRLMGLLMLSIGIEVMAAGFKGLFPNLLG
>Mature_210_residues
MDVTVYIKFFLGLVAIINPIGLLPVFVSLTSHQTEAERNHTGKIANLAVVIILLVTIVAGQHILNMFSISLSAFRIAGGT
LIAIIALSMLQGKLGEVKRNQEEDRESSAMESVAVVPLALPLMAGPGAISSVIVFAAEHNSLIDLAGMFVTVLIFGALSF
GLFRMASAIYRVLGKTGINVITRLMGLLMLSIGIEVMAAGFKGLFPNLLG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=208, Percent_Identity=55.2884615384615, Blast_Score=240, Evalue=4e-65,
Organism=Escherichia coli, GI1787809, Length=193, Percent_Identity=33.160621761658, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789842, Length=191, Percent_Identity=26.7015706806283, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22250; Mature: 22250

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTVYIKFFLGLVAIINPIGLLPVFVSLTSHQTEAERNHTGKIANLAVVIILLVTIVAG
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QHILNMFSISLSAFRIAGGTLIAIIALSMLQGKLGEVKRNQEEDRESSAMESVAVVPLAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PLMAGPGAISSVIVFAAEHNSLIDLAGMFVTVLIFGALSFGLFRMASAIYRVLGKTGINV
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ITRLMGLLMLSIGIEVMAAGFKGLFPNLLG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDVTVYIKFFLGLVAIINPIGLLPVFVSLTSHQTEAERNHTGKIANLAVVIILLVTIVAG
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QHILNMFSISLSAFRIAGGTLIAIIALSMLQGKLGEVKRNQEEDRESSAMESVAVVPLAL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PLMAGPGAISSVIVFAAEHNSLIDLAGMFVTVLIFGALSFGLFRMASAIYRVLGKTGINV
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ITRLMGLLMLSIGIEVMAAGFKGLFPNLLG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]