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The map label for this gene is nudL [H]

Identifier: 119774822

GI number: 119774822

Start: 2060046

End: 2060654

Strand: Reverse

Name: nudL [H]

Synonym: Sama_1686

Alternate gene names: 119774822

Gene position: 2060654-2060046 (Counterclockwise)

Preceding gene: 119774823

Following gene: 119774820

Centisome position: 47.85

GC content: 52.38

Gene sequence:

>609_bases
ATGCCCTTTAACGGCGCCGATGCCATTAGTGTTGACAAACTCAGGTTGCACTTTTCATTGCAGCCACTTCGTCATGCCAT
AGTGTCGGCCCCGCTGAAATCCAGGGTAAGAGAAGCGGCAGTACTGATGGCGCTTGAAGAGCTGAACGGTGAACTTCAGC
TCATACTCACCACCCGCCCCACCCACCTTAAAGCCCATCCCGGTCAGGTGAGTTTTCCCGGCGGAAAAGTAGAGCCAAGC
GATCTTAGCCCCACACATACGGCGTTCAGGGAAGCCGAAGAAGAAATCGGCCTGCGAAGTGAGAATTTAGAGCTCTTGGG
CCAGTTCCCCACCCACAGAACCTTCACCGGCTTTGAAATCACCCCGGTGCTGGCACTTGTGAAAGACCCATTTGAGATAA
AAATCGATCCCGGTGAAGTCGCTGAGTGTTTTCGGGTGCCACTGCACTTTTTTATGCAGGACAAACACAGACACATTAGG
CAATTTCAGCGCCAGGGACATAGCTACCATGTGGTATTTATCCCCTGGGAAGGACGCCTTATTTGGGGCGCCACTGCAGC
AATGATAGATTTACTCTGCCGTCACCTGAAAGACGGTGGCGCCATTTAA

Upstream 100 bases:

>100_bases
TGGGGGCGTGGTGGCCGACTCAATTGCCGACAGCGAGTATCAGGAAACCTTCGACAAGATCAGCCGTATTCTACCGATAC
TGGAACAGGAATAATTGTTT

Downstream 100 bases:

>100_bases
CATCCTGCGGGAATAAAACGCGATTGGACTGAGTCAGTGGAGCGTGAGCACTCGGATGTATGCGCCGAAAATGCACTACA
CCCAAAAACTCATATAAAGG

Product: MutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPFNGADAISVDKLRLHFSLQPLRHAIVSAPLKSRVREAAVLMALEELNGELQLILTTRPTHLKAHPGQVSFPGGKVEPS
DLSPTHTAFREAEEEIGLRSENLELLGQFPTHRTFTGFEITPVLALVKDPFEIKIDPGEVAECFRVPLHFFMQDKHRHIR
QFQRQGHSYHVVFIPWEGRLIWGATAAMIDLLCRHLKDGGAI

Sequences:

>Translated_202_residues
MPFNGADAISVDKLRLHFSLQPLRHAIVSAPLKSRVREAAVLMALEELNGELQLILTTRPTHLKAHPGQVSFPGGKVEPS
DLSPTHTAFREAEEEIGLRSENLELLGQFPTHRTFTGFEITPVLALVKDPFEIKIDPGEVAECFRVPLHFFMQDKHRHIR
QFQRQGHSYHVVFIPWEGRLIWGATAAMIDLLCRHLKDGGAI
>Mature_201_residues
PFNGADAISVDKLRLHFSLQPLRHAIVSAPLKSRVREAAVLMALEELNGELQLILTTRPTHLKAHPGQVSFPGGKVEPSD
LSPTHTAFREAEEEIGLRSENLELLGQFPTHRTFTGFEITPVLALVKDPFEIKIDPGEVAECFRVPLHFFMQDKHRHIRQ
FQRQGHSYHVVFIPWEGRLIWGATAAMIDLLCRHLKDGGAI

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=169, Percent_Identity=31.9526627218935, Blast_Score=88, Evalue=5e-18,
Organism=Escherichia coli, GI1788115, Length=153, Percent_Identity=34.640522875817, Blast_Score=79, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17510677, Length=158, Percent_Identity=33.5443037974684, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17536993, Length=134, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI18859683, Length=167, Percent_Identity=34.7305389221557, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22764; Mature: 22632

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFNGADAISVDKLRLHFSLQPLRHAIVSAPLKSRVREAAVLMALEELNGELQLILTTRP
CCCCCCCCEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
THLKAHPGQVSFPGGKVEPSDLSPTHTAFREAEEEIGLRSENLELLGQFPTHRTFTGFEI
CEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCCEECCCCH
TPVLALVKDPFEIKIDPGEVAECFRVPLHFFMQDKHRHIRQFQRQGHSYHVVFIPWEGRL
HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE
IWGATAAMIDLLCRHLKDGGAI
EECHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFNGADAISVDKLRLHFSLQPLRHAIVSAPLKSRVREAAVLMALEELNGELQLILTTRP
CCCCCCCEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
THLKAHPGQVSFPGGKVEPSDLSPTHTAFREAEEEIGLRSENLELLGQFPTHRTFTGFEI
CEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCCEECCCCH
TPVLALVKDPFEIKIDPGEVAECFRVPLHFFMQDKHRHIRQFQRQGHSYHVVFIPWEGRL
HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEE
IWGATAAMIDLLCRHLKDGGAI
EECHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA