The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is gluP [H]

Identifier: 119774799

GI number: 119774799

Start: 2035563

End: 2036810

Strand: Direct

Name: gluP [H]

Synonym: Sama_1663

Alternate gene names: 119774799

Gene position: 2035563-2036810 (Clockwise)

Preceding gene: 119774798

Following gene: 119774800

Centisome position: 47.27

GC content: 58.17

Gene sequence:

>1248_bases
ATGGCTTCCGGCGTACCTGTCACTGCCCGGCATGAAGGCGCATCCGAGGGGGGACGTTACGGCTTTGCGCTGACCTCACT
CACCACATTGTTTTTTATGTGGGGTTTTATTACCTGTCTTAACGACATCCTTATTCCGCATCTGAAAGCCGTCTTCAGCC
TGAACTATGCCCAGGCGATGTTAATTCAGTTTTGTTTCTTTGGTGCCTATTTTCTGGTGTCGGTACCGGCCGGTGTCCTG
GTAAAACGCCTCGGCTACCAAAAGGGCATAGTGGTTGGCTTGTTAACTGCGGCGCTGGGCTGTGGTCTCTTTTATCCGGC
GGCGGTATCGGCCACGTACGGCGTGTTTTTGGGGGCACTCTTTGTGCTTGCCAGCGGCATTACCGTGCTGCAGGTGGCGG
CCAATCCCTATGTGACGGCGCTGGGACCGGTGCAAACAGCCTCAAGCCGTCTGACCCTGACCCAGGCGTTTAACTCCCTG
GGTACCACCATAGCCCCGGCCTTTGGCTCTGTGCTTATCCTGTCGGTGGCCGTTGGCGCCTCTGCCGAGGCCGAAGCCGA
TGCGGTCAAGCTGCCCTATCTGCTGCTGTGTGGCATGTTGATTGTGCTGGCGGTGGTGTTTGCACTGCTGAAATTGCCCC
ATATCCATGACCAGGAAGATGAGGTGGCCGCGACTGGCCAGAGCGCGCTTGCCCATCGCCATCTGGTGCTCGGCGCCATA
GGCATATTCGTTTATGTGGGCGGTGAAGTGGCCATTGGCAGCTTTTTGGTGAACTTTTTGGGTGAATCCCATGTGGCGGG
CATGGCCGAGGCCGATGCAGCCCATTACATCGCCTTTTACTGGGGCGGTGCCATGGTGGGGCGTTTTATCGGTGCGGCCG
TGATGCAAAAAGTGGATGCCGGCAAGGTGCTGGGCTTCAATGCCACCATGGCGGCCCTGCTGGTACTGGTTGCCATGAAC
AGCAGCGGCGCCCTGGCCATGTGGGCGATTCTGGCGGTGGGGCTGTTCAACTCCATTATGTTTCCGACCATCTTCAGTCT
GGCGCTGAAAAACCTGGGCCCGGCGACAGCCCAGGGCTCGGGTATTCTGTGTCTGGCGATTGTGGGCGGCGCCCTGGTGC
CGCTGTTGCAGGGGCTTCTGGCTGATTCTGTCGGCTTGTCTGCCTCATTCATTCTGCCGGTGCTCTGCTATGGCTACATC
CTCTTTTATGGCCTGAAAGGCTGTAAGCCTGTAGCCGCCAAGGCTTGA

Upstream 100 bases:

>100_bases
CGCCTTGCATATGGGCCCGACGTGAAATACATGGGGTAAGCTTAGCTGTAGACCTCGACCATAAAATATTGAAATAACGA
TAATAATCAAGGAGAAAACT

Downstream 100 bases:

>100_bases
ATACCAGCACCTGTCGCCAGACATGAATGGCGACAGCGACAATAATGTCTGATAAAAGGCGCCGTCAGGGCGCTTTTTTA
TTGGCTGAATACACAGGGGG

Product: glucose/galactose transporter

Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MASGVPVTARHEGASEGGRYGFALTSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAMLIQFCFFGAYFLVSVPAGVL
VKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGALFVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSL
GTTIAPAFGSVLILSVAVGASAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDAGKVLGFNATMAALLVLVAMN
SSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGSGILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYI
LFYGLKGCKPVAAKA

Sequences:

>Translated_415_residues
MASGVPVTARHEGASEGGRYGFALTSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAMLIQFCFFGAYFLVSVPAGVL
VKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGALFVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSL
GTTIAPAFGSVLILSVAVGASAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDAGKVLGFNATMAALLVLVAMN
SSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGSGILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYI
LFYGLKGCKPVAAKA
>Mature_414_residues
ASGVPVTARHEGASEGGRYGFALTSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAMLIQFCFFGAYFLVSVPAGVLV
KRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGALFVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSLG
TTIAPAFGSVLILSVAVGASAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAIG
IFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDAGKVLGFNATMAALLVLVAMNS
SGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGSGILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYIL
FYGLKGCKPVAAKA

Specific function: Intake of glucose and galactose (Potential) [H]

COG id: COG0738

COG function: function code G; Fucose permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]

Homologues:

Organism=Escherichia coli, GI1789166, Length=421, Percent_Identity=34.916864608076, Blast_Score=230, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005964
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42828; Mature: 42697

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGVPVTARHEGASEGGRYGFALTSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAM
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQFCFFGAYFLVSVPAGVLVKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGAL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSLGTTIAPAFGSVLILSVAVGA
HHHHCCCCEEEEECCCCEEECCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDA
HHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVLGFNATMAALLVLVAMNSSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGS
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYILFYGLKGCKPVAAKA
CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ASGVPVTARHEGASEGGRYGFALTSLTTLFFMWGFITCLNDILIPHLKAVFSLNYAQAM
CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIQFCFFGAYFLVSVPAGVLVKRLGYQKGIVVGLLTAALGCGLFYPAAVSATYGVFLGAL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLASGITVLQVAANPYVTALGPVQTASSRLTLTQAFNSLGTTIAPAFGSVLILSVAVGA
HHHHCCCCEEEEECCCCEEECCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SAEAEADAVKLPYLLLCGMLIVLAVVFALLKLPHIHDQEDEVAATGQSALAHRHLVLGAI
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
GIFVYVGGEVAIGSFLVNFLGESHVAGMAEADAAHYIAFYWGGAMVGRFIGAAVMQKVDA
HHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GKVLGFNATMAALLVLVAMNSSGALAMWAILAVGLFNSIMFPTIFSLALKNLGPATAQGS
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GILCLAIVGGALVPLLQGLLADSVGLSASFILPVLCYGYILFYGLKGCKPVAAKA
CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]

General reaction: Permease [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168605 [H]