| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is 119774773
Identifier: 119774773
GI number: 119774773
Start: 2004252
End: 2004674
Strand: Direct
Name: 119774773
Synonym: Sama_1637
Alternate gene names: NA
Gene position: 2004252-2004674 (Clockwise)
Preceding gene: 119774772
Following gene: 119774790
Centisome position: 46.54
GC content: 53.19
Gene sequence:
>423_bases ATGCAGGTGATGGACGGTGTAACCCTGATGACCACAGCGCCGACCCCGGCGTCCCTGATAGCATTAAGACAACGGGTTGG CTGGACCAGTCCCGCAGTGAATGTGGTAGAGCAGAGTCTGGCAAATTCATTATTCATCGTTTGCGCCTATGATGGCGCCA GACTGGTGGGTACCGGCCGTATTGTGGGTGATGGCGCCATGTATTTTTATCTTCAGGACCTGCTGGTTGATCCTGAATAT CAGCGACAGGGAATAGGTCGGCTGCTGATGGAAGAGATTGAGTCATTCCTGCGCCAAAGGGCGCAGCCCGGTGCCACCAT TGGGTTGTTTGCTGCCCATGGCAAAGAGGATTTTTACCAAGCATTTGGGTATCAACGCAGGACAGGGCAAGTTCTGGGAA TGGGCATGTGCAAATTTGTGTGA
Upstream 100 bases:
>100_bases CGGGTATTGAGCGAATATTCAACGCCGAATGAGAAACCGGCATCCAAGAGGATTGGCGCAGCGCCATTGGCAAAAATGAC AATTGAAGAAAAGAGTTGAG
Downstream 100 bases:
>100_bases TGAATCATGGTGCGTTCAAGGCAGAGATCGGCACTGTCCATTCAGGACCAAACAACAGTTGAATCTCAGCCATATCACCA CTACCAGAGGTCGTTGCTGG
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; AttT Protein; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Attachment Host Cells And Virulence; Ribosomal-Protein-Alanine Acetyltransferase
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MQVMDGVTLMTTAPTPASLIALRQRVGWTSPAVNVVEQSLANSLFIVCAYDGARLVGTGRIVGDGAMYFYLQDLLVDPEY QRQGIGRLLMEEIESFLRQRAQPGATIGLFAAHGKEDFYQAFGYQRRTGQVLGMGMCKFV
Sequences:
>Translated_140_residues MQVMDGVTLMTTAPTPASLIALRQRVGWTSPAVNVVEQSLANSLFIVCAYDGARLVGTGRIVGDGAMYFYLQDLLVDPEY QRQGIGRLLMEEIESFLRQRAQPGATIGLFAAHGKEDFYQAFGYQRRTGQVLGMGMCKFV >Mature_140_residues MQVMDGVTLMTTAPTPASLIALRQRVGWTSPAVNVVEQSLANSLFIVCAYDGARLVGTGRIVGDGAMYFYLQDLLVDPEY QRQGIGRLLMEEIESFLRQRAQPGATIGLFAAHGKEDFYQAFGYQRRTGQVLGMGMCKFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15416; Mature: 15416
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVMDGVTLMTTAPTPASLIALRQRVGWTSPAVNVVEQSLANSLFIVCAYDGARLVGTGR CCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEECCE IVGDGAMYFYLQDLLVDPEYQRQGIGRLLMEEIESFLRQRAQPGATIGLFAAHGKEDFYQ EEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH AFGYQRRTGQVLGMGMCKFV HHCCCCCCCHHHCCHHHHCC >Mature Secondary Structure MQVMDGVTLMTTAPTPASLIALRQRVGWTSPAVNVVEQSLANSLFIVCAYDGARLVGTGR CCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEECCE IVGDGAMYFYLQDLLVDPEYQRQGIGRLLMEEIESFLRQRAQPGATIGLFAAHGKEDFYQ EEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH AFGYQRRTGQVLGMGMCKFV HHCCCCCCCHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA