Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774790

Identifier: 119774790

GI number: 119774790

Start: 2019007

End: 2019693

Strand: Direct

Name: 119774790

Synonym: Sama_1654

Alternate gene names: NA

Gene position: 2019007-2019693 (Clockwise)

Preceding gene: 119774773

Following gene: 119774791

Centisome position: 46.89

GC content: 49.93

Gene sequence:

>687_bases
ATGAGTGTTACTCAGATAGTTACCTCAGAAGACATATTGCTGAAACTCTGTCATTCGGTGTCCCATGTGTTGTCCCACAC
CAGTGGCAGCAGGGTCACACACGCGGCCATGGTGCAGAATATTTCCAGCACCCGTTTAAAGCCTGATCTGGGCTGCTTCT
CCATTTTCGATGGTGGGTTTTCGGGATTGGTGGTGATCAATTTCTCGGCCGCTTCTGCCGTGGAAATCTATCGCCGTTAT
ATGCTCAACATGGGCATGCCTGAAAGCGATTTGGCGTTCTCCCACAACTCCGATGAAGTCGGTAACGTGATGGGGGAACT
TATGAACCAGATCCTGGGAGACTTTATCGGTAAGGTGTCCAAGGAGCTGCAAACCTCCATCAGTCAAAGTCAGCCGAAGA
TGCTGACCATCAACAAGGAAATCACCATCTCCATTGATGCCAATCTGGATGAACCAGTGATCCGCCGGGTGTCTTTTATG
ACCGAAAGCAACCACATCTTTTATCTTGAATTTGCCATGGACAAGACAGAGTTTGTCAAAACCCGGGAGTTTGAGCTGGA
CGAGGAGTTCGATCCGGATTTCCTGATTGAGCAGCACGGCAATACCAGGTCACCCTGGTCACAGATGGCTGGCAAGGGCA
TAGTGGCCGATGATGCTGATGATTTGCTCGATGAGCTGGGGATCTAA

Upstream 100 bases:

>100_bases
CGATAAAATAGACGCTTATCAGGTTAATCGTTTGTTTTGACTTTGATTTCAAGTGATTTTATGCGCAAGATTAACTAATT
CAATCAAAAGGCGGATAAAG

Downstream 100 bases:

>100_bases
AGTCGCTTGCTATACAAGGAATTGCACTTGATTTACCATGAGCTTGCCGCTCTGTGTCGGGGCGGTGGCCAGTGGCCCGA
GCAAATATAACAAGAGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSVTQIVTSEDILLKLCHSVSHVLSHTSGSRVTHAAMVQNISSTRLKPDLGCFSIFDGGFSGLVVINFSAASAVEIYRRY
MLNMGMPESDLAFSHNSDEVGNVMGELMNQILGDFIGKVSKELQTSISQSQPKMLTINKEITISIDANLDEPVIRRVSFM
TESNHIFYLEFAMDKTEFVKTREFELDEEFDPDFLIEQHGNTRSPWSQMAGKGIVADDADDLLDELGI

Sequences:

>Translated_228_residues
MSVTQIVTSEDILLKLCHSVSHVLSHTSGSRVTHAAMVQNISSTRLKPDLGCFSIFDGGFSGLVVINFSAASAVEIYRRY
MLNMGMPESDLAFSHNSDEVGNVMGELMNQILGDFIGKVSKELQTSISQSQPKMLTINKEITISIDANLDEPVIRRVSFM
TESNHIFYLEFAMDKTEFVKTREFELDEEFDPDFLIEQHGNTRSPWSQMAGKGIVADDADDLLDELGI
>Mature_227_residues
SVTQIVTSEDILLKLCHSVSHVLSHTSGSRVTHAAMVQNISSTRLKPDLGCFSIFDGGFSGLVVINFSAASAVEIYRRYM
LNMGMPESDLAFSHNSDEVGNVMGELMNQILGDFIGKVSKELQTSISQSQPKMLTINKEITISIDANLDEPVIRRVSFMT
ESNHIFYLEFAMDKTEFVKTREFELDEEFDPDFLIEQHGNTRSPWSQMAGKGIVADDADDLLDELGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25377; Mature: 25246

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTQIVTSEDILLKLCHSVSHVLSHTSGSRVTHAAMVQNISSTRLKPDLGCFSIFDGGF
CCCHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
SGLVVINFSAASAVEIYRRYMLNMGMPESDLAFSHNSDEVGNVMGELMNQILGDFIGKVS
CEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KELQTSISQSQPKMLTINKEITISIDANLDEPVIRRVSFMTESNHIFYLEFAMDKTEFVK
HHHHHHHHHCCCCEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
TREFELDEEFDPDFLIEQHGNTRSPWSQMAGKGIVADDADDLLDELGI
HHCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SVTQIVTSEDILLKLCHSVSHVLSHTSGSRVTHAAMVQNISSTRLKPDLGCFSIFDGGF
CCHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
SGLVVINFSAASAVEIYRRYMLNMGMPESDLAFSHNSDEVGNVMGELMNQILGDFIGKVS
CEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KELQTSISQSQPKMLTINKEITISIDANLDEPVIRRVSFMTESNHIFYLEFAMDKTEFVK
HHHHHHHHHCCCCEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
TREFELDEEFDPDFLIEQHGNTRSPWSQMAGKGIVADDADDLLDELGI
HHCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA