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The map label for this gene is xapR [C]

Identifier: 119774767

GI number: 119774767

Start: 1994829

End: 1995719

Strand: Reverse

Name: xapR [C]

Synonym: Sama_1630

Alternate gene names: 119774767

Gene position: 1995719-1994829 (Counterclockwise)

Preceding gene: 119774770

Following gene: 119774765

Centisome position: 46.35

GC content: 55.44

Gene sequence:

>891_bases
GTGCAGGTTCATGACGTCGATTTAAAACTGCTGAGGATATTTGTCGCCATCGTGGAGTGCGGCGGCCTGTCGGCAGCCGA
ATCACGGCTCAATATTGGCCGCTCCACCATCAGCGCTCACCTGTCAGATTTGGAGGTGCGCCTCGGCATTAAACTGTGCA
AGCGTGGCCGCAGCGGCTTTGAACTGACAGAGTCTGGTCGGGTGACCTATCAGGCATCGCTTGAGCTGTTGCAGCACTGC
GATGCCTTTGCATCCACCGTAGCCAGTGCCAAGCAGGAGCTGGCCGGCCGGGTCAGCATTGCGGTGATTGATACCCTGGT
AAGTGACCCGCGCTGCGACATTGCCGGGGTGATTGCGGCGCTCAAGGCTAAAAGCAACCATATCCAGTTTGATATCAACG
TGTGTGAGGCGCGGGAGGTAGAAACCTCGGTGGTCAACGGCCGCTCTTTGGTCGGCATTGGGGTCAGTCGTCATCATCTG
CGCGGGCTCGATTACCATCCGCTGCATAATGAAACCAACTACCTGTATTGCGGTGTGGGTCATCCCCTGTTTGATTGCCT
GCCAGACAAGGTGCCAGCGCTGCTGCAAAACGCCGAGGTAATCACCAGTAACTACATGCGCGACAAAGAGATGCGTAACG
ACGATTTGAACTATCAGAACACCGCCACCGCCTACCACGATGAAGGCATTGCTCATCTCATCCTCTCGGGCAAGTTTATC
GGCTACCTGCCGGAGCACTACGCCAGCCACTGGGTCGATAAGGGCCTTTTCAAAGCGATTTTGCCCGAGAAATACTCCTA
CCAAATTCCTGTGGTGCTCATCACGTCAAAGAGCAATGCCGCAACGCCGCTGGCAACGGCGCTGATTGATGAGATAAAAC
GCCGTCATTAA

Upstream 100 bases:

>100_bases
ACAATAACCGTAATTCATTCCGAGTTTATCGAACTATTGTCTGGCAGGTTTGTTTGCAACTGAGCAGCATTCGATAGACA
GCCACCACAGGAAAGCATAA

Downstream 100 bases:

>100_bases
TCAATGGCCAGAATAGTCCGTAAAATCTGTTGGTAAAGCCACCAAACAGCTCTCTCGTCTGGGTATAGAACCGCCATCAA
CGCTTGAACTTGGTTTCCAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Protein; Transcriptional Regulator LysR Family Protein; Transcriptional Regulator LysR; LysR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Of LysR Family Protein; Nitrogen Assimilation Regulatory Protein Nac; Transcriptional Regulator Lysr Family; LysR Family Transcription Regulator Protein; Transcription Regulatory Protein YtlI; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGFELTESGRVTYQASLELLQHC
DAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAALKAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHL
RGLDYHPLHNETNYLYCGVGHPLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFI
GYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPLATALIDEIKRRH

Sequences:

>Translated_296_residues
MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGFELTESGRVTYQASLELLQHC
DAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAALKAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHL
RGLDYHPLHNETNYLYCGVGHPLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFI
GYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPLATALIDEIKRRH
>Mature_296_residues
MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGFELTESGRVTYQASLELLQHC
DAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAALKAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHL
RGLDYHPLHNETNYLYCGVGHPLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFI
GYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPLATALIDEIKRRH

Specific function: Positive Regulator Required For The Expression Of Xapa And Xapb. Binds To The Inducer Xanthosine. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32672; Mature: 32672

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50931 HTH_LYSR ; PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGF
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
ELTESGRVTYQASLELLQHCDAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAA
EECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LKAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHLRGLDYHPLHNETNYLYCGVG
HHCCCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCEEEEECC
HPLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFI
CHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHH
GYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPLATALIDEIKRRH
HCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGF
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
ELTESGRVTYQASLELLQHCDAFASTVASAKQELAGRVSIAVIDTLVSDPRCDIAGVIAA
EECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LKAKSNHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHLRGLDYHPLHNETNYLYCGVG
HHCCCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCEEEEECC
HPLFDCLPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFI
CHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHH
GYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSNAATPLATALIDEIKRRH
HCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA