Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774620

Identifier: 119774620

GI number: 119774620

Start: 1796061

End: 1797125

Strand: Reverse

Name: 119774620

Synonym: Sama_1483

Alternate gene names: NA

Gene position: 1797125-1796061 (Counterclockwise)

Preceding gene: 119774621

Following gene: 119774619

Centisome position: 41.73

GC content: 54.46

Gene sequence:

>1065_bases
ATGTCTTTTAACCATCAGCAAAAAGTCTATCTGCCCACGGACGCCCGTACTAACCAGTACATTACGGCAGAAATCAAACT
CACGGACGCCCTGCTGAACCAGTACCCCGATGTCATGAGCTGCTATCAGGCGCTGGCAAAACAGTTCTTTGAACTGGCAG
AACGCCATGACTTGCGCAATGTTCATGTTATCGCCAACGATAAACTGCCTGTTGTTCGCTTTCACACCGAGGCCTACTGT
CTGGAAACTGACCAGCAGGTCATTTTCTTCTACAACCCCCGCTACCACGAAGCGCAAAACCTGTTTGCCCGCGCCGATTA
CCGCACCCGTAAAATCCGCTTCCTGTTCCTGGCCGTGGGTGACGAGCTGCGCGCCAATTCCGCCAGTTTCCATACTCAGG
TACAGCAGCTGCTCAAAGAGCTTTCACCTCAGCTGGCACTGGAGCAGCCCATTAAAATCCGCGACCACCAGCACCTGACC
TATGATTTGTTCGCCCGTGCCAAAGGCAACAAGAAAACCTACGGTTATAAGCTGCGTGGGATCCCTCAGCGCTATAAGGC
CCGCAAGTGCGAACTGCCCGCAGATGTGAGCGCGCTGAGCTACGCCACTGTGACTCTGCCACTGGGCCGTCGCCTCAAAC
AGCGCCTCGGTGGTGAGCATCCCAGCAACTACGGCGATATTTACGCCAAATTGCAGGACAGCTTCCAGAAGGCCGTGTTG
GATCATGGTTTTAAACGCGCTGCCATGGTCGCCAATGGCCTGCTGCCCCTGGTGAGAAACAGTAAGTTTGATCGCCTGGA
ATCCAACAAAGGCGTGCAAATGCTGGGCTTTGATCCCAATGCCAGCGAGCCCCAGTTTTTGGCCCACTGGCAGCCAGACA
ACCTGGTAGAAACCGCCTACTTTGTGATTGCAGCCGGCAGTGAAGACCACACAGATGCAGGGTTTGGCCGCTTTATGAAT
GAAGTGGAAGATGCGCTGCGCCAGTTTGCCCGGGACATAGACCTCGATGGTGAACGTCAGGATCTGGTTATCCGCTTCCA
CCAACACATCAGCTACAAGCGCTGA

Upstream 100 bases:

>100_bases
TGAACGAAAGTGTGTGCCGGAACAACATTTCTGCAGCAATTCCCCGGTAGGATCCGCTGCAAAGAAACCAGTCAATGGTT
ATTGTACCCAAGGAGTGACT

Downstream 100 bases:

>100_bases
TGACAGGTGTGACTACCACATAATCATCTGCTTAAGATTGTTAAAAAGGAGCCTCAGGGCTCCTTTTTTGTTTCTCGTCA
GTTTTGTTCCCCCCTTCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSFNHQQKVYLPTDARTNQYITAEIKLTDALLNQYPDVMSCYQALAKQFFELAERHDLRNVHVIANDKLPVVRFHTEAYC
LETDQQVIFFYNPRYHEAQNLFARADYRTRKIRFLFLAVGDELRANSASFHTQVQQLLKELSPQLALEQPIKIRDHQHLT
YDLFARAKGNKKTYGYKLRGIPQRYKARKCELPADVSALSYATVTLPLGRRLKQRLGGEHPSNYGDIYAKLQDSFQKAVL
DHGFKRAAMVANGLLPLVRNSKFDRLESNKGVQMLGFDPNASEPQFLAHWQPDNLVETAYFVIAAGSEDHTDAGFGRFMN
EVEDALRQFARDIDLDGERQDLVIRFHQHISYKR

Sequences:

>Translated_354_residues
MSFNHQQKVYLPTDARTNQYITAEIKLTDALLNQYPDVMSCYQALAKQFFELAERHDLRNVHVIANDKLPVVRFHTEAYC
LETDQQVIFFYNPRYHEAQNLFARADYRTRKIRFLFLAVGDELRANSASFHTQVQQLLKELSPQLALEQPIKIRDHQHLT
YDLFARAKGNKKTYGYKLRGIPQRYKARKCELPADVSALSYATVTLPLGRRLKQRLGGEHPSNYGDIYAKLQDSFQKAVL
DHGFKRAAMVANGLLPLVRNSKFDRLESNKGVQMLGFDPNASEPQFLAHWQPDNLVETAYFVIAAGSEDHTDAGFGRFMN
EVEDALRQFARDIDLDGERQDLVIRFHQHISYKR
>Mature_353_residues
SFNHQQKVYLPTDARTNQYITAEIKLTDALLNQYPDVMSCYQALAKQFFELAERHDLRNVHVIANDKLPVVRFHTEAYCL
ETDQQVIFFYNPRYHEAQNLFARADYRTRKIRFLFLAVGDELRANSASFHTQVQQLLKELSPQLALEQPIKIRDHQHLTY
DLFARAKGNKKTYGYKLRGIPQRYKARKCELPADVSALSYATVTLPLGRRLKQRLGGEHPSNYGDIYAKLQDSFQKAVLD
HGFKRAAMVANGLLPLVRNSKFDRLESNKGVQMLGFDPNASEPQFLAHWQPDNLVETAYFVIAAGSEDHTDAGFGRFMNE
VEDALRQFARDIDLDGERQDLVIRFHQHISYKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40942; Mature: 40811

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNHQQKVYLPTDARTNQYITAEIKLTDALLNQYPDVMSCYQALAKQFFELAERHDLRN
CCCCCCCEEEECCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE
VHVIANDKLPVVRFHTEAYCLETDQQVIFFYNPRYHEAQNLFARADYRTRKIRFLFLAVG
EEEEECCCCCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEEEEC
DELRANSASFHTQVQQLLKELSPQLALEQPIKIRDHQHLTYDLFARAKGNKKTYGYKLRG
CHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEHHEECCCCCCCCCEEECC
IPQRYKARKCELPADVSALSYATVTLPLGRRLKQRLGGEHPSNYGDIYAKLQDSFQKAVL
CCHHHHCCCCCCCCCCHHHEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DHGFKRAAMVANGLLPLVRNSKFDRLESNKGVQMLGFDPNASEPQFLAHWQPDNLVETAY
HCCHHHHHHHHHCCHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCEEEECCCCCHHEEEE
FVIAAGSEDHTDAGFGRFMNEVEDALRQFARDIDLDGERQDLVIRFHQHISYKR
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFNHQQKVYLPTDARTNQYITAEIKLTDALLNQYPDVMSCYQALAKQFFELAERHDLRN
CCCCCCEEEECCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE
VHVIANDKLPVVRFHTEAYCLETDQQVIFFYNPRYHEAQNLFARADYRTRKIRFLFLAVG
EEEEECCCCCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEEEEC
DELRANSASFHTQVQQLLKELSPQLALEQPIKIRDHQHLTYDLFARAKGNKKTYGYKLRG
CHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEHHEECCCCCCCCCEEECC
IPQRYKARKCELPADVSALSYATVTLPLGRRLKQRLGGEHPSNYGDIYAKLQDSFQKAVL
CCHHHHCCCCCCCCCCHHHEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DHGFKRAAMVANGLLPLVRNSKFDRLESNKGVQMLGFDPNASEPQFLAHWQPDNLVETAY
HCCHHHHHHHHHCCHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCEEEECCCCCHHEEEE
FVIAAGSEDHTDAGFGRFMNEVEDALRQFARDIDLDGERQDLVIRFHQHISYKR
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA