Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774596

Identifier: 119774596

GI number: 119774596

Start: 1768677

End: 1769288

Strand: Reverse

Name: 119774596

Synonym: Sama_1459

Alternate gene names: NA

Gene position: 1769288-1768677 (Counterclockwise)

Preceding gene: 119774599

Following gene: 119774595

Centisome position: 41.09

GC content: 57.19

Gene sequence:

>612_bases
ATGCAGAATATTTCTCAGGGACGACGGCCCTACTATGTCACTGCGGCGATGGTCGCCGCAGAGCTTAACCACACGCTCGC
CAGTTGCAAGGAAATCAATCTCACCGCCAGTAATGCCCAGGCGGCCTCAAGCCGAATCGGCAGCGCCGCGCTTGGATTCA
AGGCACTAACCCACTATATCGATGAGCTCGCCGGTTACACCAAGCGCGCTGCCAACGAAATCAATCAACTGGCAAAGGAA
GCCAGCAAGCTGGCAACCCGCACAGCACGCACCGCCACGGCGCTGCACTATTTTCATGCAGCCCGGGACAAGGCCAGCAC
CGCCGCCTACGCCTACAGCATGGCGGGCGCTATCGAAACCACAGAAGAGCATTACGCCAAATTGGAGAGTGATTTCAATC
AGGTGCTCAGTAAGATGCAGGTACAGTTGTTGGATTTAAAACAAAACCTTCGCAGCGCCAACGCCCTCGCCTCCATCTGC
CGGGTCGAGGCTTGCCGGGTCGACGGACGATTTCAGACCATCTTCGTGGACGTGGCCAACAAGGTCGATACGGTTGCCGC
TCAGATCCGCGAGCGGGTAGATACTGCCATCCGCCTGTTCGATTCCCATTGA

Upstream 100 bases:

>100_bases
TCCAAAGCAGCTCCTAAAGCAAAGCCGCTGAATATTTCTTCGCGGCGCAAATTTATTAACCCTGACTATACTTTAGCTGT
CATCGGGAAGGAAATTCATC

Downstream 100 bases:

>100_bases
CGTTAAGGATTAACCAATGAAGACACAATTACTGGTCGAGACCCCCACTCACAAATGGCTGTATTTCGGCAGAGACCCTG
AGAAAAACGACAAAATCATC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQNISQGRRPYYVTAAMVAAELNHTLASCKEINLTASNAQAASSRIGSAALGFKALTHYIDELAGYTKRAANEINQLAKE
ASKLATRTARTATALHYFHAARDKASTAAYAYSMAGAIETTEEHYAKLESDFNQVLSKMQVQLLDLKQNLRSANALASIC
RVEACRVDGRFQTIFVDVANKVDTVAAQIRERVDTAIRLFDSH

Sequences:

>Translated_203_residues
MQNISQGRRPYYVTAAMVAAELNHTLASCKEINLTASNAQAASSRIGSAALGFKALTHYIDELAGYTKRAANEINQLAKE
ASKLATRTARTATALHYFHAARDKASTAAYAYSMAGAIETTEEHYAKLESDFNQVLSKMQVQLLDLKQNLRSANALASIC
RVEACRVDGRFQTIFVDVANKVDTVAAQIRERVDTAIRLFDSH
>Mature_203_residues
MQNISQGRRPYYVTAAMVAAELNHTLASCKEINLTASNAQAASSRIGSAALGFKALTHYIDELAGYTKRAANEINQLAKE
ASKLATRTARTATALHYFHAARDKASTAAYAYSMAGAIETTEEHYAKLESDFNQVLSKMQVQLLDLKQNLRSANALASIC
RVEACRVDGRFQTIFVDVANKVDTVAAQIRERVDTAIRLFDSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22232; Mature: 22232

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNISQGRRPYYVTAAMVAAELNHTLASCKEINLTASNAQAASSRIGSAALGFKALTHYI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DELAGYTKRAANEINQLAKEASKLATRTARTATALHYFHAARDKASTAAYAYSMAGAIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEEHYAKLESDFNQVLSKMQVQLLDLKQNLRSANALASICRVEACRVDGRFQTIFVDVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KVDTVAAQIRERVDTAIRLFDSH
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQNISQGRRPYYVTAAMVAAELNHTLASCKEINLTASNAQAASSRIGSAALGFKALTHYI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DELAGYTKRAANEINQLAKEASKLATRTARTATALHYFHAARDKASTAAYAYSMAGAIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEEHYAKLESDFNQVLSKMQVQLLDLKQNLRSANALASICRVEACRVDGRFQTIFVDVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KVDTVAAQIRERVDTAIRLFDSH
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA