Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774595

Identifier: 119774595

GI number: 119774595

Start: 1767926

End: 1768660

Strand: Reverse

Name: 119774595

Synonym: Sama_1458

Alternate gene names: NA

Gene position: 1768660-1767926 (Counterclockwise)

Preceding gene: 119774596

Following gene: 119774584

Centisome position: 41.07

GC content: 53.33

Gene sequence:

>735_bases
ATGAAGACACAATTACTGGTCGAGACCCCCACTCACAAATGGCTGTATTTCGGCAGAGACCCTGAGAAAAACGACAAAAT
CATCGACACCAACCAATATCTGGTTCAAAGCGGAAATCAGTCGTTGCTAATGGACCCCGGCGGAATTGAACTTTTTGCCC
CCATGTTGGCCAGTCTGGTGCGCCATATCCCCCTCGAGCAGCTGACCTATCTTTTTGCCTCCCATCAGGATCCGGACATC
ATTTCATCCCTCGGTCTGTGGGATCAGACGCTGCCCAAGGCCAAGCTCTACGCCCCCTGGCTGTGGGAGGGGTTTATCCG
TCACTTCGGGATGAACAACATCAGCTACGAGCCCATCAAGGATAAGGGGGGGAAATTACAGGTGGGTGAAGTGGAGCTGC
AGTTTGTACCCGCCCATTACCTGCATGCGTCCGGCAATTTTCACGTGTATGACCCAGTGGCCAAGGTGCTGATGTCGGGG
GACGTGGGCGCGGCGCTTGAGCCCGCAGAGGCTGACATTTTTGTGGATGACTTTGCCAGTCACATCAGCAAGATGGAGTA
CTTCCACCGTCGCTGGATGCCCTCCAATCGTGCCAAGAGTAACTGGGTGGCACGGATGCGGGATCTGGATATTCAGTACA
TGTGCCCACAACATGGACGCATCTTTAAAGGTCCGCAGGTGAAAGCCTTTTTGGATTGGTTTGACAGTCTGGATGTGGGT
ATCGGACTGGATTAA

Upstream 100 bases:

>100_bases
GACGTGGCCAACAAGGTCGATACGGTTGCCGCTCAGATCCGCGAGCGGGTAGATACTGCCATCCGCCTGTTCGATTCCCA
TTGACGTTAAGGATTAACCA

Downstream 100 bases:

>100_bases
TGCAAAAAAGGCCCCTGGGGGCCTTTTTTGATTGAGTACACTCAGCTAGAGATAACGAGCGTACTGCATACCGTCTCTGC
CAGGTTTCACCGGCGCATCA

Product: flavoprotein

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Flavoprotein; Histidine Kinase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Diguanylate Cyclase Domain Protein; Metallo-Beta-Lactamase Domain Protein; CDP-Abequose Synthase; Two-Component Sensor Histidine Kinase; Metallo-Beta-Lactamase Superfamily Hydrolase

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKTQLLVETPTHKWLYFGRDPEKNDKIIDTNQYLVQSGNQSLLMDPGGIELFAPMLASLVRHIPLEQLTYLFASHQDPDI
ISSLGLWDQTLPKAKLYAPWLWEGFIRHFGMNNISYEPIKDKGGKLQVGEVELQFVPAHYLHASGNFHVYDPVAKVLMSG
DVGAALEPAEADIFVDDFASHISKMEYFHRRWMPSNRAKSNWVARMRDLDIQYMCPQHGRIFKGPQVKAFLDWFDSLDVG
IGLD

Sequences:

>Translated_244_residues
MKTQLLVETPTHKWLYFGRDPEKNDKIIDTNQYLVQSGNQSLLMDPGGIELFAPMLASLVRHIPLEQLTYLFASHQDPDI
ISSLGLWDQTLPKAKLYAPWLWEGFIRHFGMNNISYEPIKDKGGKLQVGEVELQFVPAHYLHASGNFHVYDPVAKVLMSG
DVGAALEPAEADIFVDDFASHISKMEYFHRRWMPSNRAKSNWVARMRDLDIQYMCPQHGRIFKGPQVKAFLDWFDSLDVG
IGLD
>Mature_244_residues
MKTQLLVETPTHKWLYFGRDPEKNDKIIDTNQYLVQSGNQSLLMDPGGIELFAPMLASLVRHIPLEQLTYLFASHQDPDI
ISSLGLWDQTLPKAKLYAPWLWEGFIRHFGMNNISYEPIKDKGGKLQVGEVELQFVPAHYLHASGNFHVYDPVAKVLMSG
DVGAALEPAEADIFVDDFASHISKMEYFHRRWMPSNRAKSNWVARMRDLDIQYMCPQHGRIFKGPQVKAFLDWFDSLDVG
IGLD

Specific function: Unknown

COG id: COG0426

COG function: function code C; Uncharacterized flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27920; Mature: 27920

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQLLVETPTHKWLYFGRDPEKNDKIIDTNQYLVQSGNQSLLMDPGGIELFAPMLASLV
CCCEEEEECCCCEEEEECCCCCCCCCEEECCHHHHHCCCCEEEECCCCHHHHHHHHHHHH
RHIPLEQLTYLFASHQDPDIISSLGLWDQTLPKAKLYAPWLWEGFIRHFGMNNISYEPIK
HHCCHHHHHHHHHCCCCCHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
DKGGKLQVGEVELQFVPAHYLHASGNFHVYDPVAKVLMSGDVGAALEPAEADIFVDDFAS
CCCCEEEEEEEEEEEECCEEEECCCCEEEECHHHHHHHCCCCCCCCCCCCCCEEHHHHHH
HISKMEYFHRRWMPSNRAKSNWVARMRDLDIQYMCPQHGRIFKGPQVKAFLDWFDSLDVG
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCEECCCCHHHHHHHHHCCCCC
IGLD
CCCC
>Mature Secondary Structure
MKTQLLVETPTHKWLYFGRDPEKNDKIIDTNQYLVQSGNQSLLMDPGGIELFAPMLASLV
CCCEEEEECCCCEEEEECCCCCCCCCEEECCHHHHHCCCCEEEECCCCHHHHHHHHHHHH
RHIPLEQLTYLFASHQDPDIISSLGLWDQTLPKAKLYAPWLWEGFIRHFGMNNISYEPIK
HHCCHHHHHHHHHCCCCCHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
DKGGKLQVGEVELQFVPAHYLHASGNFHVYDPVAKVLMSGDVGAALEPAEADIFVDDFAS
CCCCEEEEEEEEEEEECCEEEECCCCEEEECHHHHHHHCCCCCCCCCCCCCCEEHHHHHH
HISKMEYFHRRWMPSNRAKSNWVARMRDLDIQYMCPQHGRIFKGPQVKAFLDWFDSLDVG
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCEECCCCHHHHHHHHHCCCCC
IGLD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA