| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is bglA [H]
Identifier: 119774539
GI number: 119774539
Start: 1701207
End: 1702565
Strand: Reverse
Name: bglA [H]
Synonym: Sama_1402
Alternate gene names: 119774539
Gene position: 1702565-1701207 (Counterclockwise)
Preceding gene: 119774544
Following gene: 119774538
Centisome position: 39.54
GC content: 54.23
Gene sequence:
>1359_bases ATGACAACACTCTCGCATTTCACCCTGCCGGGCGATTCAGTAATGATGCAAAAAGATTTTTTATTTGGCGTCGCCACCGC CTCGTTTCAAATTGAAGGCGACGCTGAACATCGTCAGCCCTGTATCTGGGACACCTTTTGCGATACCCCAGGCAAAATTG CGGATGGTTCGAACGGTCAGGTTGCCTGCGATCATGTCAAGCTCTGGCGTGACGATGTTGACCTGATTGCCTCCCTTGGG GTGGATGCCTACCGCCTGTCCATCAGTTGGGGACGGGTGTTACATCCCGATGGCAGTGTGAACCAGCGCGGCATGGATTT TTACATTAATCTCCTGGATGAGCTTGGTCGCCGGGGCATTAACGTGTTCGTCACCCTCTACCACTGGGACTTACCTCAGC ATCTTGAGGACAAAGGTGGCTGGCTCAATCGTGACACAGCAGTGGCCTTTGCCAACTACGCCGCCATTGTGGCCAACGCC CTGGGTAACAGGGTGTATGCCTATTCAACCCTGAATGAGCCATTTTGCAGCGCCTTTCTCGGCTATGAGGCAGGTATTCA CGCTCCCGGCCACAAGAGCCGTCAGCAGGGCCGCACAGCCGCCCACAATTTGCTGCTGGCCCACGGTATGGCAATGACTG AAATTCGACGGGAAGCACCAGAGGCCAAAGCGGGCATAGTGCTTAATTTCAGCCCGGCTTATCCCTACACATCCAGTGCC GGGGATGCCAACGCCGCCCGACTGGCCCATGAATATCACAACACCTGGTACTTGATGCCACTGATGGAAGGCCGTTATCC GGACATCATCAATCAACTCGAGCCCCATGAACGCCCGGTTGTGGAGCCCGGTGATATGGATATCATCAGTACACCAATCG ATTATCTGGGGATCAACTACTATACCCGTAACGTCTACCGCGCTGGCGGCCCGCTTGGCTTTGAAGAAGTGCGTATCGAT AACGTGCCCCGTACCGCCATGGATTGGGAAATTTGCCCCCAGGCCTTTACCGACTTGCTGACAGGTCTGGCACAGGAATT TAACCTGCCACCAATTTACATCACTGAAAATGGCGCTGCCGAAGACGATGCGCCATTTAACGGCACTGTGCACGACCCCA TGCGACTGGACTATTTGCAGTCTCATCTGCTGGCTGTTCATCAGGCTATCGAACGCGGAGTGGATATCAAAGGCTACTTT GCCTGGAGTCTGATGGACAACTTTGAGTGGGCGGAAGGCTACCGCAAACGCTTTGGACTGGTCTATGTCGACTATGGGAC CCAGCAGCGCATACTCAAATCCAGCGCCAAAGCCTATCAGGGAATGCTTGCCATACGCCAAGAGGCCAGCCAACAATAA
Upstream 100 bases:
>100_bases CCCTTGTCAACTTGTTTTACCGGTAAAACCCTGCTCTGACACCCAGTCACAGGGAGCTAAGGTAAAGGGCGCAAGGCTGA GATCTGGAAAAAGGATAACG
Downstream 100 bases:
>100_bases TAATAACGGAGGTCGCCATGCTGAGCGTCAGAGAAAAAATTGCTTATGGGCTGGGAGATACCGCCAGCAACATCGTTTTT CAAACCGTCATGCTGTTCCT
Product: Beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQVACDHVKLWRDDVDLIASLG VDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGINVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANA LGNRVYAYSTLNEPFCSAFLGYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINYYTRNVYRAGGPLGFEEVRID NVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAAEDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYF AWSLMDNFEWAEGYRKRFGLVYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ
Sequences:
>Translated_452_residues MTTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQVACDHVKLWRDDVDLIASLG VDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGINVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANA LGNRVYAYSTLNEPFCSAFLGYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINYYTRNVYRAGGPLGFEEVRID NVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAAEDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYF AWSLMDNFEWAEGYRKRFGLVYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ >Mature_451_residues TTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQVACDHVKLWRDDVDLIASLGV DAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGINVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANAL GNRVYAYSTLNEPFCSAFLGYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSAG DANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINYYTRNVYRAGGPLGFEEVRIDN VPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAAEDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYFA WSLMDNFEWAEGYRKRFGLVYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=459, Percent_Identity=33.9869281045752, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI13273313, Length=461, Percent_Identity=33.8394793926247, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI110681710, Length=462, Percent_Identity=33.982683982684, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI24497614, Length=461, Percent_Identity=31.8872017353579, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI28376633, Length=447, Percent_Identity=30.6487695749441, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI190360571, Length=131, Percent_Identity=34.3511450381679, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=28.8702928870293, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1789070, Length=416, Percent_Identity=28.3653846153846, Blast_Score=152, Evalue=6e-38, Organism=Escherichia coli, GI2367270, Length=465, Percent_Identity=28.1720430107527, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17552856, Length=470, Percent_Identity=30.4255319148936, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17539390, Length=463, Percent_Identity=29.3736501079914, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI21356577, Length=463, Percent_Identity=33.4773218142549, Blast_Score=232, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 50681; Mature: 50549
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQ CCCCCEEECCCCCEEEEHHHEEEEEEEEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCC VACDHVKLWRDDVDLIASLGVDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGI EEEHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCC NVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANALGNRVYAYSTLNEPFCSAFL EEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH GYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINY CCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHCCCC YTRNVYRAGGPLGFEEVRIDNVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAA EECEEEECCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC EDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYFAWSLMDNFEWAEGYRKRFGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCHHHHHHHHHCCE VYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTLSHFTLPGDSVMMQKDFLFGVATASFQIEGDAEHRQPCIWDTFCDTPGKIADGSNGQ CCCCEEECCCCCEEEEHHHEEEEEEEEEEECCCCCCCCCCEEHHHCCCCCCCCCCCCCC VACDHVKLWRDDVDLIASLGVDAYRLSISWGRVLHPDGSVNQRGMDFYINLLDELGRRGI EEEHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCC NVFVTLYHWDLPQHLEDKGGWLNRDTAVAFANYAAIVANALGNRVYAYSTLNEPFCSAFL EEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH GYEAGIHAPGHKSRQQGRTAAHNLLLAHGMAMTEIRREAPEAKAGIVLNFSPAYPYTSSA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC GDANAARLAHEYHNTWYLMPLMEGRYPDIINQLEPHERPVVEPGDMDIISTPIDYLGINY CCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHCCCC YTRNVYRAGGPLGFEEVRIDNVPRTAMDWEICPQAFTDLLTGLAQEFNLPPIYITENGAA EECEEEECCCCCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC EDDAPFNGTVHDPMRLDYLQSHLLAVHQAIERGVDIKGYFAWSLMDNFEWAEGYRKRFGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCHHHHHHHHHCCE VYVDYGTQQRILKSSAKAYQGMLAIRQEASQQ EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]