The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774398

Identifier: 119774398

GI number: 119774398

Start: 1548284

End: 1550113

Strand: Direct

Name: 119774398

Synonym: Sama_1261

Alternate gene names: NA

Gene position: 1548284-1550113 (Clockwise)

Preceding gene: 119774396

Following gene: 119774399

Centisome position: 35.96

GC content: 52.08

Gene sequence:

>1830_bases
ATGCAAAAAACGTTGTTGGCAATGGTAGTGGCTTCGGTATTCGCGCTGTCGGGATGTTCACAGGAAAATACGGCCGCAGT
CTCAGGCACAAACGTTGATGCACAGGGCCGCGCTGCAGTCGCCTCGGAGGAAACAGCGCAGAGTCGCTATTTAGCCATGG
TAGACAGCTACTTTAAGGATTTCCTTAAACTCGAACCGATTTATGCCACTTTTTTTGGAGTAAATGATTATAACGCCGAG
TTTGGTGGCGATCTGTCCGACGAATACCTCAAAGCCCGCCACGACTATAATACCCGCTATCTGGCACAGGCGAGGAAGAT
AGATAAGTCAGCGTTACCCGCGGATTTGCAGCTCTCCTATGACTTATTTGTTTACGATCGCAACATGGCCTTGGTCGATG
AGACTTTTCCGGCTCGTTTCCTGCCCATGAATCAGTTTTACAGTACAGTTATCACCATGATCCAGCTCGGCAGCGGTGAG
GCTGCGCAGCCATTTGTGACCAAACAGGATTACCTGAACTGGGAGTCAAGGGTAGATGGCTTTATTGCCTGGCTTGAAAG
GGCCCAGGCGCGCATGAATGAAGGTATGGCCAGCAAGGTAGTTCTGCCAAGAATATTGGTAGAACGCATGATCCCGCAGT
TCACAGCCCAGCAGGTCACAGATGTCAAAGACAGTATTTTTTATGCCCCGGTAAAGTCCCTGCCGGAGACGTTCAGCGAG
CAGGATAGAGCGGAAATCGAAGCGCGTTATCAGGCAATGATTGCCCAGCGTCTGCTGCCTGCATTGGCGAAAATGGAAGA
CTTCCTGAAAGACACTTATCTGCCTGCGGCCCGCGCGACAGACGGTTGGTCAGGGCTGCCTAACGGTAAGGCCTGGTATC
AGCATCTGGCCAATCTGCATACCACTACCGGCAAGTCGGTTGATGAAATTCATGAGACTGGTCTTAACGAAGTCGCCCGT
ATTTTGTCCGAAATGGACAAGGTTCGGCAGCAGGTCGGCTTCGAAGGCGGCCTTAAAGCCTTTTTTGCTTCGCTTTCCAG
CGAGCCTCAGTACTTCTTCACTGAGCGGCAGGAACTGATTGACGGCTATATGGCGCTTAAAGACACAATCAATCAGGTGC
TGCCTCAGTATTTTAACGTGATGCCCAAGGCAGATTACGTCGTCAAACCCGTTGAGTCTTTCCGTGAGCAGTCGGCCGCG
GGAGCCTCTTATGAATCTCCAGCGGTGGATGGCAGTCGTCCTGGGGTATTCTACATCAACACCTATAACCTTAAGGCTCA
GCCAAAGTGGGGAATGACCACACTGTCACTTCACGAGGCGGCGCCGGGCCACCATTTCCAGATTGCCATTAAGCAAGAGC
TGACTGGCGTACCCGAGTTCCAGCGCTTCAGTGGCTATACCGCATTTGAAGAAGGTTGGGCGCTGTATGCCGAGTATTTG
GGCATCGAGATGGGGCTTTTCAGCGACCCTTATCAATACTTTGGTAAGCTCTCGGATGAGATGCTGCGTGCGATGCGCCT
GGTGGTGGATACAGGTTTACATGCCAAGGGCTGGAGCCGCGAGCAGGCCATTCAGTATATGAAAGACAATTCGCCGATGG
CCGAATCTGACATCATCGCCGAAGTAGAACGTTATATGGCCATCCCCGGTCAGGCGCTGTCCTATAAGGTCGGTCAGCTT
AAGATCCTGGAACTGAGGGCTGATGCTGAAAAGCGCTTGGGAGATAAGTTCAGTCTGCCTGCTTTCCACGACCAGATCCT
GACGTCGGGATCGTTGCCAATGGCTGTGATGGAGCAAAAGGTCGACCGTTGGGTTAAAAGCCAGCTGTAA

Upstream 100 bases:

>100_bases
AATTTCTAAATGAATAAATCATAAGGCGAACTCCTGCGTTAACTTAATTATCAGTATAGAAAACATCGCAGGTTACATCG
TCATAGGGAGATGAAAGACT

Downstream 100 bases:

>100_bases
GGAAAATCTTAAGCCCGGCTGTTAATTCGTACGCAAGTCCCTATACTGGAATTCCTGCCGAGGTTAGCAGGCCATAGGTT
GTAAAAACGCCGGGCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MQKTLLAMVVASVFALSGCSQENTAAVSGTNVDAQGRAAVASEETAQSRYLAMVDSYFKDFLKLEPIYATFFGVNDYNAE
FGGDLSDEYLKARHDYNTRYLAQARKIDKSALPADLQLSYDLFVYDRNMALVDETFPARFLPMNQFYSTVITMIQLGSGE
AAQPFVTKQDYLNWESRVDGFIAWLERAQARMNEGMASKVVLPRILVERMIPQFTAQQVTDVKDSIFYAPVKSLPETFSE
QDRAEIEARYQAMIAQRLLPALAKMEDFLKDTYLPAARATDGWSGLPNGKAWYQHLANLHTTTGKSVDEIHETGLNEVAR
ILSEMDKVRQQVGFEGGLKAFFASLSSEPQYFFTERQELIDGYMALKDTINQVLPQYFNVMPKADYVVKPVESFREQSAA
GASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYL
GIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQL
KILELRADAEKRLGDKFSLPAFHDQILTSGSLPMAVMEQKVDRWVKSQL

Sequences:

>Translated_609_residues
MQKTLLAMVVASVFALSGCSQENTAAVSGTNVDAQGRAAVASEETAQSRYLAMVDSYFKDFLKLEPIYATFFGVNDYNAE
FGGDLSDEYLKARHDYNTRYLAQARKIDKSALPADLQLSYDLFVYDRNMALVDETFPARFLPMNQFYSTVITMIQLGSGE
AAQPFVTKQDYLNWESRVDGFIAWLERAQARMNEGMASKVVLPRILVERMIPQFTAQQVTDVKDSIFYAPVKSLPETFSE
QDRAEIEARYQAMIAQRLLPALAKMEDFLKDTYLPAARATDGWSGLPNGKAWYQHLANLHTTTGKSVDEIHETGLNEVAR
ILSEMDKVRQQVGFEGGLKAFFASLSSEPQYFFTERQELIDGYMALKDTINQVLPQYFNVMPKADYVVKPVESFREQSAA
GASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYL
GIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQL
KILELRADAEKRLGDKFSLPAFHDQILTSGSLPMAVMEQKVDRWVKSQL
>Mature_609_residues
MQKTLLAMVVASVFALSGCSQENTAAVSGTNVDAQGRAAVASEETAQSRYLAMVDSYFKDFLKLEPIYATFFGVNDYNAE
FGGDLSDEYLKARHDYNTRYLAQARKIDKSALPADLQLSYDLFVYDRNMALVDETFPARFLPMNQFYSTVITMIQLGSGE
AAQPFVTKQDYLNWESRVDGFIAWLERAQARMNEGMASKVVLPRILVERMIPQFTAQQVTDVKDSIFYAPVKSLPETFSE
QDRAEIEARYQAMIAQRLLPALAKMEDFLKDTYLPAARATDGWSGLPNGKAWYQHLANLHTTTGKSVDEIHETGLNEVAR
ILSEMDKVRQQVGFEGGLKAFFASLSSEPQYFFTERQELIDGYMALKDTINQVLPQYFNVMPKADYVVKPVESFREQSAA
GASYESPAVDGSRPGVFYINTYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYL
GIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQALSYKVGQL
KILELRADAEKRLGDKFSLPAFHDQILTSGSLPMAVMEQKVDRWVKSQL

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68636; Mature: 68636

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTLLAMVVASVFALSGCSQENTAAVSGTNVDAQGRAAVASEETAQSRYLAMVDSYFKD
CCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLKLEPIYATFFGVNDYNAEFGGDLSDEYLKARHDYNTRYLAQARKIDKSALPADLQLSY
HHHCCCHHHEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
DLFVYDRNMALVDETFPARFLPMNQFYSTVITMIQLGSGEAAQPFVTKQDYLNWESRVDG
EEEEEECCEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHH
FIAWLERAQARMNEGMASKVVLPRILVERMIPQFTAQQVTDVKDSIFYAPVKSLPETFSE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDRAEIEARYQAMIAQRLLPALAKMEDFLKDTYLPAARATDGWSGLPNGKAWYQHLANLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TTTGKSVDEIHETGLNEVARILSEMDKVRQQVGFEGGLKAFFASLSSEPQYFFTERQELI
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
DGYMALKDTINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYIN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
TYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYL
EEEEEECCCCCCEEEEHHCCCCCCEEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHH
GIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
EVERYMAIPGQALSYKVGQLKILELRADAEKRLGDKFSLPAFHDQILTSGSLPMAVMEQK
HHHHHHCCCCHHHEEECCCEEEEEECCCHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHH
VDRWVKSQL
HHHHHHHCC
>Mature Secondary Structure
MQKTLLAMVVASVFALSGCSQENTAAVSGTNVDAQGRAAVASEETAQSRYLAMVDSYFKD
CCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLKLEPIYATFFGVNDYNAEFGGDLSDEYLKARHDYNTRYLAQARKIDKSALPADLQLSY
HHHCCCHHHEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
DLFVYDRNMALVDETFPARFLPMNQFYSTVITMIQLGSGEAAQPFVTKQDYLNWESRVDG
EEEEEECCEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHH
FIAWLERAQARMNEGMASKVVLPRILVERMIPQFTAQQVTDVKDSIFYAPVKSLPETFSE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDRAEIEARYQAMIAQRLLPALAKMEDFLKDTYLPAARATDGWSGLPNGKAWYQHLANLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
TTTGKSVDEIHETGLNEVARILSEMDKVRQQVGFEGGLKAFFASLSSEPQYFFTERQELI
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
DGYMALKDTINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYIN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
TYNLKAQPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYL
EEEEEECCCCCCEEEEHHCCCCCCEEEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHH
GIEMGLFSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
EVERYMAIPGQALSYKVGQLKILELRADAEKRLGDKFSLPAFHDQILTSGSLPMAVMEQK
HHHHHHCCCCHHHEEECCCEEEEEECCCHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHH
VDRWVKSQL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA